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SCN18_26_2_15_R5_B_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_105_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1050
DNA (1050bp) protein (350aa)
fadD; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
PREDICTED: 4-coumarate--CoA ligase-like 9-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15E28
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KIF81151.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
SCN18_26_2_15_R5_B_scaffold_105_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1121..1564
DNA (444bp) protein (148aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1598..2572)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0S9_STAND
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCN18_26_2_15_R5_B_scaffold_105_4
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(2604..3320)
DNA (717bp) protein (239aa)
Dienelactone hydrolase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVJ4_FRASU
dienelactone hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_5
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3406..4758
DNA (1353bp) protein (451aa)
glutamyl-tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZJ6_9RHIZ
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_6
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4935..6266
DNA (1332bp) protein (444aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=SYC_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_7
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6263..6574)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI000367046C
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6586..7362)
DNA (777bp) protein (259aa)
acyl-CoA thioesterase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DC36C0
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_9
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7365..8177)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E7F836
alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCN18_26_2_15_R5_B_scaffold_105_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8383..8667
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R7Z1_9DELT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8734..9333)
DNA (600bp) protein (200aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9452..10243)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=uncultured actinobacterium HF0770_13M05 RepID=E7C748_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:GAN78157.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
alpha/beta hydrolase
SCN18_26_2_15_R5_B_scaffold_105_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10248..11522)
DNA (1275bp) protein (425aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured actinobacterium HF0770_13M05 RepID=E7C747_9ACTN
luciferase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11731..13020
DNA (1290bp) protein (430aa)
crotonyl-CoA reductase (EC:1.6.5.5)
crotonyl-CoA reductase n=1 Tax=Kiloniella laminariae RepID=UPI00036D0461
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_15
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13134..14774
DNA (1641bp) protein (547aa)
Acyl-CoA dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYV6_AZOBR
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AIB16167.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_26_2_15_R5_B_scaffold_105_16
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14815..15204
DNA (390bp) protein (130aa)
Glyoxalase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HGV9_9RHIZ
Glyoxalase {ECO:0000313|EMBL:ESZ56390.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_26_2_15_R5_B_scaffold_105_17
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15226..16182)
DNA (957bp) protein (319aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
proline iminopeptidase (EC:3.4.11.5)
proline iminopeptidase n=1 Tax=Variovorax paradoxus RepID=UPI00035C8227
SCN18_26_2_15_R5_B_scaffold_105_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16301..16750
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K592_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM40040.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCN18_26_2_15_R5_B_scaffold_105_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16755..17489)
DNA (735bp) protein (245aa)
Regulatory protein IclR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRC4_PARL1
Transcriptional regulator {ECO:0000313|EMBL:ETR78341.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
DNA-binding transcriptional activator MhpR
SCN18_26_2_15_R5_B_scaffold_105_20
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17588..18571
DNA (984bp) protein (328aa)
MFS transporter n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI0003710287
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYS84880.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_105_21
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18583..19464
DNA (882bp) protein (294aa)
Taurine dioxygenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZI8_9BRAD
dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19478..20125
DNA (648bp) protein (216aa)
Putative hydrolase n=1 Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1VY81_STRGG
HAD-superfamily hydrolase, subfamily IA, variant 3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_23
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20122..21543
DNA (1422bp) protein (474aa)
Amine oxidase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZQ3_9GAMM
monoamine oxidase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_24
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21550..21762
DNA (213bp) protein (71aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_25
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21766..22362
DNA (597bp) protein (199aa)
ATP:cob(I)alamin adenosyltransferase involved in cofactor biosynthesis for adenosylcobalamin-dependent methylmalonyl-CoA mutase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARQ3_AZOBR
meaD; ATP:cob(I)alamin adenosyltransferase involved in cofactor biosynthesis for adenosylcobalamin-dependent methylmalonyl-CoA mutase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_26
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22520..23269
DNA (750bp) protein (250aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYS5_RHOCS
etfS; electron transfer flavoprotein subunit beta
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_27
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23271..24206
DNA (936bp) protein (312aa)
Electron transfer flavoprotein alpha-subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARQ5_AZOBR
etfA; electron transfer flavoprotein alpha-subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_28
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24230..25102
DNA (873bp) protein (291aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H5G5_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_105_29
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25122..26591
DNA (1470bp) protein (490aa)
Beta-hydroxylase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HLC9_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44258.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Microcystin LR degradation protein MlrC-like protein
SCN18_26_2_15_R5_B_scaffold_105_30
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26605..27705
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG36_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41602.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
NADH:flavin oxidoreductase
Displaying items 1-30 of 135 in total

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