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SCN18_26_2_15_R5_B_scaffold_289

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_289_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..240)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000308A6D1
Branched-chain amino acid transport system permeas e protein LivM {ECO:0000313|EMBL:CDP54139.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
inner-membrane translocator
SCN18_26_2_15_R5_B_scaffold_289_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(237..1109)
DNA (873bp) protein (291aa)
Inner-membrane translocator n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGD1_9BRAD
branched-chain amino acid ABC transporter permease
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCN18_26_2_15_R5_B_scaffold_289_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1148..2350)
DNA (1203bp) protein (401aa)
Leu/Ile/Val-binding protein 5 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEC0_9RHIZ
ABC-type branched-chain amino acid transport system periplasmic component {ECO:0000313|EMBL:EYR83616.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
twin-arginine translocation pathway signal
SCN18_26_2_15_R5_B_scaffold_289_4
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2494..3669)
DNA (1176bp) protein (392aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07GV7_RHOP5
iron-containing alcohol dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_5
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3683..4426)
DNA (744bp) protein (248aa)
Dienelactone hydrolase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISF5_RHOP2
dienelactone hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_6
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4501..5706
DNA (1206bp) protein (402aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZF9_9BURK
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EHL22333.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
carnitine dehydratase
SCN18_26_2_15_R5_B_scaffold_289_7
SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, Bacteroidetes, Bacteria

Not on your lists

5717..6571
DNA (855bp) protein (285aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1KCK6_BURCC
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC55949.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
short-chain dehydrogenase/reductase SDR
SCN18_26_2_15_R5_B_scaffold_289_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6834..7808)
DNA (975bp) protein (325aa)
Putative lipoprotein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MS65_BORBM
lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCN18_26_2_15_R5_B_scaffold_289_9
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7856..8773)
DNA (918bp) protein (306aa)
taurine dioxygenase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B70FC4
taurine dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCN18_26_2_15_R5_B_scaffold_289_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8860..9573
DNA (714bp) protein (238aa)
GntR family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B38E45
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:CCJ62272.1}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 /; 18323).;"
SCN18_26_2_15_R5_B_scaffold_289_11
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9689..10075)
DNA (387bp) protein (129aa)
Putative aminoacrylate peracid reductase RutC {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023348}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023353};; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
Putative aminoacrylate peracid reductase RutC n=5 Tax=Agrobacterium RepID=F0L2B9_AGRSH
endoribonuclease L-PSP
SCN18_26_2_15_R5_B_scaffold_289_12
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10092..11783)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GPY5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC57813.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
Von Willebrand factor type A
SCN18_26_2_15_R5_B_scaffold_289_13
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11807..12892)
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPV1_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ23835.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_26_2_15_R5_B_scaffold_289_14
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12928..14121)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00038006E1
RND transporter MFP subunit
RND transporter MFP subunit {ECO:0000313|EMBL:AJP48495.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCN18_26_2_15_R5_B_scaffold_289_15
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14127..17318)
DNA (3192bp) protein (1064aa)
RagC protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJE6_9BRAD
RagC protein {ECO:0000313|EMBL:CCE06584.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
RND transporter
SCN18_26_2_15_R5_B_scaffold_289_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17428..19074
DNA (1647bp) protein (549aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRG3_9PROT
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EDP64527.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
glucose-methanol-choline oxidoreductase
SCN18_26_2_15_R5_B_scaffold_289_17
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19167..20042
DNA (876bp) protein (292aa)
Methyltransferase, FkbM family, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYG5_RHOCS
Mycobacterium llatzerense strain CLUC14 Mllat_contig000029, whole genome shotgun sequence {ECO:0000313|EMBL:KIU15322.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
FkbM family methyltransferase
SCN18_26_2_15_R5_B_scaffold_289_18
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(19972..21228)
DNA (1257bp) protein (419aa)
Glycosyltransferase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1G3_9PROT
glycosyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_19
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21479..22915
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L0S1_9FIRM
Aminotransferase DegT {ECO:0000313|EMBL:EZQ15529.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
DegT/DnrJ/EryC1/StrS aminotransferase
SCN18_26_2_15_R5_B_scaffold_289_20
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22924..24312
DNA (1389bp) protein (463aa)
aminotransferase DegT n=1 Tax=Gluconacetobacter europaeus RepID=UPI0003655D39
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:AHI24760.1}; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus E25.;"
SCN18_26_2_15_R5_B_scaffold_289_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24217..24636)
DNA (420bp) protein (140aa)
Thioesterase superfamily protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VGR2_RHOPX
thioesterase superfamily protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_22
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24641..25042)
DNA (402bp) protein (134aa)
Thioesterase superfamily protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIY2_RHOM4
thioesterase superfamily protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_23
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25039..26568)
DNA (1530bp) protein (510aa)
putative indolepyruvate oxidoreductase subunit B (EC:1.2.7.8)
Ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAZ1_MAGSA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_24
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26561..28717)
DNA (2157bp) protein (719aa)
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AFL5_9PROT
indolepyruvate ferredoxin oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_25
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28734..29387)
DNA (654bp) protein (218aa)
DTW domain containing protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JI40_OLICO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_26
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29422..30216
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) RepID=B8LZR9_TALSN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_27
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30237..30458
DNA (222bp) protein (74aa)
Biotin/lipoate binding domain protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R0W0_9RHIZ
biotin/lipoyl attachment domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_28
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30451..31509
DNA (1059bp) protein (353aa)
Putative membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J2KQT6_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_289_29
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31527..32138)
DNA (612bp) protein (204aa)
Hydrolase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D1R1_BRAJP
hydrolase
Hydrolase {ECO:0000313|EMBL:BAL06744.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCN18_26_2_15_R5_B_scaffold_289_30
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32150..33400)
DNA (1251bp) protein (417aa)
Molecular chaperone, HSP70 class n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CHM2_9RHIZ
Molecular chaperone, HSP70 class {ECO:0000313|EMBL:EIZ82940.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
Molecular chaperone, HSP70 class
Displaying items 1-30 of 51 in total

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