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SCN18_26_2_15_R5_B_scaffold_685

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_685_1
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..896)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E74F5F
FAD-dependent oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_685_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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961..2613
DNA (1653bp) protein (551aa)
benzoylformate decarboxylase (EC:4.1.1.7)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GSL0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF80577.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCN18_26_2_15_R5_B_scaffold_685_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2651..3436)
DNA (786bp) protein (262aa)
HpcH/HpaI aldolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK79_9PROT
HpcH/HpaI aldolase {ECO:0000313|EMBL:EDP67005.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
HpcH/HpaI aldolase
SCN18_26_2_15_R5_B_scaffold_685_4
Rhodanobacter denitrificans_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3476..3910
DNA (435bp) protein (145aa)
Putative ring-cleavage extradiol dioxygenase n=1 Tax=Polaromonas sp. CF318 RepID=J3CV61_9BURK
Putative ring-cleavage extradiol dioxygenase {ECO:0000313|EMBL:EJL78866.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
lactoylglutathione lyase
SCN18_26_2_15_R5_B_scaffold_685_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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4015..5616
DNA (1602bp) protein (534aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000375ECAD
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76115.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
peptide ABC transporter substrate-binding protein
SCN18_26_2_15_R5_B_scaffold_685_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5652..6599
DNA (948bp) protein (316aa)
peptide ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D51244
Peptide ABC transporter permease {ECO:0000313|EMBL:ETR76113.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
peptide ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_685_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6612..7505
DNA (894bp) protein (298aa)
diguanylate cyclase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FF2BBE
Diguanylate cyclase {ECO:0000313|EMBL:ETR76112.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
peptide ABC transporter permease
SCN18_26_2_15_R5_B_scaffold_685_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7517..8506
DNA (990bp) protein (330aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B7A8A8
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETR76111.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
peptide ABC transporter ATP-binding protein
SCN18_26_2_15_R5_B_scaffold_685_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8549..9520
DNA (972bp) protein (324aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003621355
peptide ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_685_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9575..11191
DNA (1617bp) protein (539aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRT6_9PROT
glucose-methanol-choline oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_685_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11246..11671
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00035C8128
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_685_12
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11807..12805
DNA (999bp) protein (333aa)
TetR/AcrR family transcriptional regulator n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IDK8_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_685_13
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12889..14013
DNA (1125bp) protein (375aa)
Peroxiredoxin n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMI0_9RHIZ
Peroxiredoxin {ECO:0000313|EMBL:EIM25172.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
SCN18_26_2_15_R5_B_scaffold_685_14
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14027..14605)
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM32781.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCN18_26_2_15_R5_B_scaffold_685_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14658..17579)
DNA (2922bp) protein (974aa)
VgrG protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R5S3_9DELT
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:CDI01718.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
Rhs element Vgr protein
SCN18_26_2_15_R5_B_scaffold_685_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17631..18092)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5W2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM32780.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_685_17
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18276..20594)
DNA (2319bp) protein (773aa)
TPR repeat n=1 Tax=Nitrosospira sp. APG3 PF4_9PROT">RepID=M5DPF4_9PROT
type 11 methyltransferase
Tax=GWA2_Rhodocyclales_65_20_curated
Displaying 17 items

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