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SCN18_31_3_15_R1_B_scaffold_481

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_31_3_15_R1_B_scaffold_481_1
unknown

Not on your lists

comp(2..73)
DNA (72bp) protein (24aa)

This feature has no annotations

SCN18_31_3_15_R1_B_scaffold_481_2
unknown

Not on your lists

comp(334..552)
DNA (219bp) protein (73aa)

This feature has no annotations

SCN18_31_3_15_R1_B_scaffold_481_3
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1767..2834)
DNA (1068bp) protein (356aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
rfbB; dTDP-D-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SC12_9BRAD
SCN18_31_3_15_R1_B_scaffold_481_4
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2847..3731)
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
glucose-1-phosphate thymidylyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036B18F9
SCN18_31_3_15_R1_B_scaffold_481_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4401..5174
DNA (774bp) protein (258aa)
Diadenosine tetraphosphatase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YEZ7_9BRAD
Diadenosine tetraphosphatase {ECO:0000313|EMBL:EHR01458.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
prp1; serine/threonine protein phosphatase I
SCN18_31_3_15_R1_B_scaffold_481_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5182..5574)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003626BD9
Uncharacterized protein {ECO:0000313|EMBL:KJC49455.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_481_7
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6620..7672
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000376875E
Uncharacterized protein {ECO:0000313|EMBL:KJC40978.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_481_8
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7717..8703
DNA (987bp) protein (329aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002EA29E1
UDP-4-amino-4-deoxy-L-arabinose formyltransferase
SCN18_31_3_15_R1_B_scaffold_481_9
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8783..9358)
DNA (576bp) protein (192aa)
SCN18_31_3_15_R1_B_scaffold_481_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9642..15260
DNA (5619bp) protein (1873aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RCC1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKC38903.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_481_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16840..17928
DNA (1089bp) protein (363aa)
glycosyl transferase family 2 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B43D14
Polypeptide N-acetylgalactosaminyltransferase 5
Polypeptide N-acetylgalactosaminyltransferase 5 {ECO:0000313|EMBL:AGZ41484.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCN18_31_3_15_R1_B_scaffold_481_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18215..18790
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B497BB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ41472.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCN18_31_3_15_R1_B_scaffold_481_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18810..20381
DNA (1572bp) protein (524aa)
acyl-CoA ligase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B38592
acetyl-coenzyme A synthetase
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:AGZ41471.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCN18_31_3_15_R1_B_scaffold_481_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20378..21604
DNA (1227bp) protein (409aa)
diaminopimelate decarboxylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3A624
Pyridoxal-dependent decarboxylase exosortase system type 1 protein {ECO:0000313|EMBL:EJZ06970.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
pyridoxal-dependent decarboxylase exosortase system type 1 protein
SCN18_31_3_15_R1_B_scaffold_481_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21649..21906
DNA (258bp) protein (86aa)
acyl carrier protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B56D48
hypothetical protein
Acyl carrier protein {ECO:0000313|EMBL:AEH83870.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCN18_31_3_15_R1_B_scaffold_481_16
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22204..22458
DNA (255bp) protein (85aa)
Putative insertion element (IS) transposase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G7R2_9BRAD
putative insertion element (IS) transposase
Putative insertion element (IS) transposase {ECO:0000313|EMBL:BAL76799.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_31_3_15_R1_B_scaffold_481_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22420..23733)
DNA (1314bp) protein (438aa)
hemolysin secretion protein D n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034D575B
Hemolysin secretion protein D {ECO:0000313|EMBL:KGT78751.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
HlyD family type I secretion membrane fusion protein
SCN18_31_3_15_R1_B_scaffold_481_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23730..25670)
DNA (1941bp) protein (647aa)
type I secretion protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B75E5A
Type I secretion system ABC transporter, PrtD family {ECO:0000313|EMBL:EHR01488.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
Type I secretion system ATPase, PrtD
SCN18_31_3_15_R1_B_scaffold_481_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25750..28908)
DNA (3159bp) protein (1053aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YF26_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KGT78752.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_481_20
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29621..30121
DNA (501bp) protein (167aa)
glycosyl transferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B75BEA
Glycosyl transferase {ECO:0000313|EMBL:KGT79238.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
oligosaccharide biosynthesis protein Alg14-like protein
SCN18_31_3_15_R1_B_scaffold_481_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30118..30630
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B6DAD7
Uncharacterized protein {ECO:0000313|EMBL:KGT78755.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
SCN18_31_3_15_R1_B_scaffold_481_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30770..31819
DNA (1050bp) protein (350aa)
oxidoreductase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B18CB
Oxidoreductase {ECO:0000313|EMBL:KGT78756.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
oxidoreductase-like
SCN18_31_3_15_R1_B_scaffold_481_23
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31864..33351
DNA (1488bp) protein (496aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QBA6_9BRAD
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:EIG57062.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
polysaccharide biosynthesis protein
SCN18_31_3_15_R1_B_scaffold_481_24
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33379..33861
DNA (483bp) protein (161aa)
acetyltransferase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000374546A
Acetyltransferase {ECO:0000313|EMBL:KGT78757.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hexapaptide repeat-containing transferase
SCN18_31_3_15_R1_B_scaffold_481_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34019..35128
DNA (1110bp) protein (370aa)
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QBA8_9BRAD
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:EIG57064.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
DegT/DnrJ/EryC1/StrS aminotransferase
SCN18_31_3_15_R1_B_scaffold_481_26
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35193..36197
DNA (1005bp) protein (335aa)
NAD-dependent epimerase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036647FE
NAD-dependent epimerase {ECO:0000313|EMBL:KGT79239.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
NAD-dependent epimerase/dehydratase
SCN18_31_3_15_R1_B_scaffold_481_27
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36194..37330
DNA (1137bp) protein (379aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJ16_NITHX
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ABE63781.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_31_3_15_R1_B_scaffold_481_28
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

37390..38367
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035EAC56
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU35695.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCN18_31_3_15_R1_B_scaffold_481_29
SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, Bacteroidetes, Bacteria

Not on your lists

38357..39385
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037D3AF0
Marine sediment metagenome DNA, contig: S03H2_S01324 {ECO:0000313|EMBL:GAH61760.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyl transferase family protein
SCN18_31_3_15_R1_B_scaffold_481_30
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39427..40776
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003621B8B
Putative uncharacterized protein {ECO:0000313|EMBL:EHR01484.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
Displaying items 1-30 of 60 in total

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