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SCN18_25_1_16_R2_B_scaffold_152_18

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(12165..12365)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLF4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 68.0
  • Bit_score: 70
  • Evalue 3.90e-10
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 68.0
  • Bit_score: 70
  • Evalue 1.10e-10
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABE62943.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 68.0
  • Bit_score: 70
  • Evalue 5.40e-10

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Taxonomy

Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGCAGACCGGTACGATCAAATTCTGGCAGCGCGAGAAAGGTTGGGGTTTCATTACCCCGGACGACGGCGGACCAGACGTCTTCATTCACTTTCGCGGCTGCGCGGGCACCTACATCCCGTTCGATGCTGATCCGGTTCGGTACGAAGTCGGCGAACGAGACGGCAGGCCGGTCGCACGTCGGGTTGAGCTTGTTGAATAA
PROTEIN sequence
Length: 67
MQTGTIKFWQREKGWGFITPDDGGPDVFIHFRGCAGTYIPFDADPVRYEVGERDGRPVARRVELVE*