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SCN18_10_11_15_R4_B_scaffold_1230

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_1230_1
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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89..1474
DNA (1386bp) protein (462aa)
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex {ECO:0000313|EMBL:CCV10416.1}; EC=2.3.1.168 {ECO:0000313|EMBL:CCV10416.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F273_9RHIZ
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
SCN18_10_11_15_R4_B_scaffold_1230_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1474..1698
DNA (225bp) protein (75aa)
Mll4891 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98D25_RHILO
hypothetical protein
Mll4891 protein {ECO:0000313|EMBL:BAB51446.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_10_11_15_R4_B_scaffold_1230_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1695..3104
DNA (1410bp) protein (470aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FC4E78
SCN18_10_11_15_R4_B_scaffold_1230_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3125..3835)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003636EBD
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDP51226.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
transcriptional regulator, GntR family
SCN18_10_11_15_R4_B_scaffold_1230_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4141..5337
DNA (1197bp) protein (399aa)
UPI0003D03B01 related cluster n=1 Tax=unknown RepID=UPI0003D03B01
Cytosine deaminase {ECO:0000313|EMBL:ESZ28715.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
cytosine deaminase
SCN18_10_11_15_R4_B_scaffold_1230_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5334..6812
DNA (1479bp) protein (493aa)
N-ethylammeline chlorohydrolase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC30_RHIRD
N-ethylammeline chlorohydrolase {ECO:0000313|EMBL:KDP73515.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
trzA; N-ethylammeline chlorohydrolase
SCN18_10_11_15_R4_B_scaffold_1230_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6860..7831
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C3B23
Uncharacterized protein {ECO:0000313|EMBL:CDP51221.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1230_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7849..8562)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LGH1_RALME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF10755.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCN18_10_11_15_R4_B_scaffold_1230_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8747..9502
DNA (756bp) protein (252aa)
Hydantoin racemase {ECO:0000313|EMBL:CDP51227.1}; EC=5.1.99.- {ECO:0000313|EMBL:CDP51227.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F7B35
Asp/Glu/hydantoin racemase
SCN18_10_11_15_R4_B_scaffold_1230_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9499..10797
DNA (1299bp) protein (433aa)
2-isopropylmalate synthase n=1 Tax=Rhodococcus opacus RepID=UPI00029CB044
Putative homocitrate synthase AksA
Putative homocitrate synthase AksA {ECO:0000313|EMBL:AHK29374.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
SCN18_10_11_15_R4_B_scaffold_1230_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10888..12456
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BF932
Oligopeptide ABC transporter, periplasmic oligopep tide-binding protein {ECO:0000313|EMBL:CDP51228.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative D,D-dipeptide-binding periplasmic protein ddpA
SCN18_10_11_15_R4_B_scaffold_1230_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12464..13501
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003718FAA
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:CDP51229.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Dipeptide transport system permease protein dppB
SCN18_10_11_15_R4_B_scaffold_1230_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13504..14358
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E6D38
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:CDP51230.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative D,D-dipeptide transport system permease protein ddpC
SCN18_10_11_15_R4_B_scaffold_1230_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14355..15368
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003766538
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CDP51231.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Oligopeptide transport ATP-binding protein AppD
SCN18_10_11_15_R4_B_scaffold_1230_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15365..16177
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FAEC0
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KFL27963.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Oligopeptide transport ATP-binding protein OppF
SCN18_10_11_15_R4_B_scaffold_1230_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16193..17263
DNA (1071bp) protein (357aa)
sugar phosphate isomerase n=1 Tax=Rhodococcus opacus RepID=UPI00029CC629
Uncharacterized protein yihM
Uncharacterized protein yihM {ECO:0000313|EMBL:AHK29370.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
SCN18_10_11_15_R4_B_scaffold_1230_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17333..17683
DNA (351bp) protein (117aa)
Endoribonuclease L-PSP n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0E3N3_9BURK
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:KFC64705.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
endoribonuclease L-PSP
SCN18_10_11_15_R4_B_scaffold_1230_18
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17696..18688
DNA (993bp) protein (331aa)
cAMP-binding protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KGG7_9BURK
cAMP-binding protein {ECO:0000313|EMBL:EJE52750.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Crp/Fnr family transcriptional regulator
Displaying 18 items

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