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SCN18_10_11_15_R4_B_scaffold_581_30

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(31622..32743)

Top 3 Functional Annotations

Value Algorithm Source
TRAP-T family transporter, DctP (Periplasmic binding) subunit n=1 Tax=Rhizobium sp. RepID=L0NII5_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 373.0
  • Bit_score: 406
  • Evalue 1.70e-110
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEQ10434.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 373.0
  • Bit_score: 411
  • Evalue 1.20e-111
TRAP C4-dicarboxylate transporter subunit DctP similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 372.0
  • Bit_score: 401
  • Evalue 2.00e-109

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGAGAATGCTTGCAAGCCTGCTTGCGGCCGCTTCGCTGGCCGCCATCGCGTTCACCGCCGCAGAGGCCAGGGATCTGCGGCTGGCTTCCGGCGCCCCGCCGGTCCACCCGGCCGCCGACCCGCTCTACAAGAGCTTCGCAGAGTTCCTGCCGCAGGAGACCAACGGCGCCCTCAGCGGCATCCTGATCGGACCCGAGGTCGTCAATATCGGCCAGGTCAAGCAGGCGCTGCAGTCCTCGCTGGCCGAGGTCGGCAACCTGCTGCCGCTGTTCGCAGCCGCCGACCTGCCCAACACGGTGCTGACGGCAGACCTCGCCTTCCTCGCCACCAACCCGCATGCGATGGGCGCGGCGATGACCGAATACGTCGTCACCTGCGCCGACTGCCAGGCGGAGTTCAAGAAGATGGGCGGCGTGTTCATGGGCGCCGGCTCGTCTGACGTCTACGTGCTCTTGACCACCAAGCCGGTCCGCTCGATGGCCGACCTCAAGGGCCTGCGCCTGCGCTCGGGCGGCGCGCCCTATGCGCGCTGGGCCGAGGCGGTCGGCGCCGCACCGGCGCAGGTGCCGGTCAGCGACACGTTCGAGTCCCTTTCCCAAGGCGTCCTCGACGGCACCATGGCCTCGATCTCCGACCTCGTCTCCTACCGGCTGATCGACGTGGCGAAATACGTGATCGAGCTGCCGCTCGGCACCTATCACACCACCTCCAACTTCACCGTCGCCAGCGCGGCCTGGTCCTCGCTGACCCCAGACGAGCGCAAGGGCTTCGCCCGCGCCGCCAACAAGTCGAGCGCGCTGTTCACGCAGAACTGGGGCTACGACCGGCCGGACAACGTCCGCAAGATGGCGAAGGACAAGGGGCTCGAGCTGATCCCCGCCTCGCAGGACATGCTCGACGCCACCGACGCCTTCCGCAAGAGCGACCCCGAGACGGCGGTGAAGATCGCCGAGAGCCAGCTCGGCGTGAAGGACGCAGCCGCCAAGATAGCGCACTTCCGCGAGCTCGTCGACAAGTGGACGAAGATCGTCGACGAGGCCGGCGGCGACGTCGGCAAGATCACGGCAAAGGTGCAGGAAGAGGTCTGGGACAAGGTCGACTACTCGACCTACGGCCTGTGA
PROTEIN sequence
Length: 374
MRMLASLLAAASLAAIAFTAAEARDLRLASGAPPVHPAADPLYKSFAEFLPQETNGALSGILIGPEVVNIGQVKQALQSSLAEVGNLLPLFAAADLPNTVLTADLAFLATNPHAMGAAMTEYVVTCADCQAEFKKMGGVFMGAGSSDVYVLLTTKPVRSMADLKGLRLRSGGAPYARWAEAVGAAPAQVPVSDTFESLSQGVLDGTMASISDLVSYRLIDVAKYVIELPLGTYHTTSNFTVASAAWSSLTPDERKGFARAANKSSALFTQNWGYDRPDNVRKMAKDKGLELIPASQDMLDATDAFRKSDPETAVKIAESQLGVKDAAAKIAHFRELVDKWTKIVDEAGGDVGKITAKVQEEVWDKVDYSTYGL*