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SCN18_10_11_15_R4_B_scaffold_1690_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 1380..3035

Top 3 Functional Annotations

Value Algorithm Source
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054587};; Betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 548.0
  • Bit_score: 953
  • Evalue 7.60e-275
choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 548.0
  • Bit_score: 949
  • Evalue 3.80e-274
Choline dehydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FNU7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 548.0
  • Bit_score: 953
  • Evalue 7.10e-275

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGCAGCCTGAGGCCGACTTCGTCATCGTCGGCGCCGGCTCGGCCGGCTGCGCGCTCGCCTACCGGCTGTCGGAGGACGGCCGGCATTCGGTGATCGTCATCGAATATGGCGGCTCGGACGCCGGGCCGCTGATCCAGATGCCGGCGGCGCTGTCGATCCCGATGAACATGAGCCTCTACGACTGGGGCTTTTCCAGCGAGCCGGAGCCGCATCTGGGCGGGCGCGTGCTCGCCACGCCGCGCGGCAAGGTGCTCGGCGGCTCGTCCTCGATCAACGGCATGGTCTATGTGCGTGGCCACGCCCGCGACTACGACCACTGGGCGGAAGCGGGCGCGGCCGGCTGGAGCTTCGCGGACGTGCTGCCCTATTTCCGCCGGATGGAGGACGCCGCCGAGGGCGACCCCGCCTGGCGCGGCAAAGGCGGACCGCTGCACGTCCAGCGTGGCCCGCGCACCAACCCGCTCTACCGCGCCTTCGTCGAGGCGGGCCGGCAGGCTGGGTTCGAGGTGACCGACGACTACAACGGCGCCAAGCAGGAAGGCTTCGGCGACATGGAGCAGACCATCCGGCTCGGCCGCCGCTGGTCCGCCGCCAACGCCTATCTGAGGCCTGCGCTGAAGCGCCGGAACGTGAGGCTTCTCAGGGGCTTCGCGCGGCGCGTGGTCATCGAGAATCAACGCGCGACCGGCGTCGAAGTCGAACTTCGCGGACAGATTCAGGTCGTTAAGGCGCGACGTGAAGTGATCGTCGCCGCCTCCTCGATCAACTCGCCGAAGCTCTTGATGCTGTCGGGCATCGGCCCGGCCGAGCAGCTCAGGGCCAACGGCATCCGGGTGGTGGCCGACCGGCCGGGCGTCGGACAGAACCTTCAGGACCACCTGGAGGTGTACATCCAGCAGGAATCGCTGAAGCCCATCACCCTCAACGGCAGGCTCGGGCTCGTCTCGCGCGGGCTGATCGGCGCGCGCTGGCTCGCCTTCAAGTCGGGGCTCGGCGCCAGCAACCATTTCGAGGCGGCCGCCTTCGTGCGGTCGCGGGCCGGCGTCGACTATCCCGACATCCAGTACCATTTCCTGCCCGCCGCGATCCGCTACGACGGCAAGCTCGCGGCCAAGGGTCACGGCTTCCAGGCGCATGTCGGGCCGATGCGGTCGAAGTCGCGCGGCTCGGTCGCGCTGCGCTCGCCCGACCCGGCCGAGAAGCCGGCGATCCGCTTCAACTACATGTCGCATCCCGACGACTGGACCGACTTCCGCCACTGCGTGCGACTGACGCGCGAGATCTTCGGGCAGCAGGCCTTCGACGACTTCCGCGGCCGCGAGATCTCGCCGGGCGCCGGGGTCGAAACGGACGACGAGATCGACGCCTTCATCCGCGACCATGTCGAGAGCGCCTACCATCCCTGCGGCACCTGCCGCATGGGCCGCGCCGAGGACCGCGGCAGCGTGGTCGACCCGACATGCCGGGTGATCGGCGTCGAGGGGCTGCGGGTCGCCGATTCGTCGGTCTTCCCGCGCATCACCAACGGCAACCTCAACGCCCCATCGATCATGGTCGGCGAGAAGGTGTCCGACCACGTCCTCGGCCGCGCGCCGCTGCCGCCGTCGAACCTCGAGCCGTGGATCAACCCGCGCTGGCAGGCGAGCGACCGCTGA
PROTEIN sequence
Length: 552
MQPEADFVIVGAGSAGCALAYRLSEDGRHSVIVIEYGGSDAGPLIQMPAALSIPMNMSLYDWGFSSEPEPHLGGRVLATPRGKVLGGSSSINGMVYVRGHARDYDHWAEAGAAGWSFADVLPYFRRMEDAAEGDPAWRGKGGPLHVQRGPRTNPLYRAFVEAGRQAGFEVTDDYNGAKQEGFGDMEQTIRLGRRWSAANAYLRPALKRRNVRLLRGFARRVVIENQRATGVEVELRGQIQVVKARREVIVAASSINSPKLLMLSGIGPAEQLRANGIRVVADRPGVGQNLQDHLEVYIQQESLKPITLNGRLGLVSRGLIGARWLAFKSGLGASNHFEAAAFVRSRAGVDYPDIQYHFLPAAIRYDGKLAAKGHGFQAHVGPMRSKSRGSVALRSPDPAEKPAIRFNYMSHPDDWTDFRHCVRLTREIFGQQAFDDFRGREISPGAGVETDDEIDAFIRDHVESAYHPCGTCRMGRAEDRGSVVDPTCRVIGVEGLRVADSSVFPRITNGNLNAPSIMVGEKVSDHVLGRAPLPPSNLEPWINPRWQASDR*