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SCN18_26_2_15_R1_P_scaffold_828

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_P_scaffold_828_1
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(163..627)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003642CA2
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDX11400.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
marR family transcriptional regulator
SCN18_26_2_15_R1_P_scaffold_828_2
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

690..1421
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037228A1
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AID32281.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
NAD-dependent epimerase/dehydratase
SCN18_26_2_15_R1_P_scaffold_828_3
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1442..1954
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000365245F
Cupin domain protein (Modular protein) {ECO:0000313|EMBL:CDX28291.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cupin 2 domain-containing protein
SCN18_26_2_15_R1_P_scaffold_828_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2020..3903
DNA (1884bp) protein (628aa)
Chloride channel protein EriC n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHF6_MESAW
Chloride channel protein EriC {ECO:0000313|EMBL:AGB44436.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
chloride channel protein EriC
SCN18_26_2_15_R1_P_scaffold_828_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3937..4182)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4S4_STAND
Uncharacterized protein {ECO:0000313|EMBL:EZQ12916.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_26_2_15_R1_P_scaffold_828_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4297..4506)
DNA (210bp) protein (70aa)
Cold shock protein n=5 Tax=Rhizobium/Agrobacterium group RepID=Q7CRN4_AGRT5
cspA2; Cold shock protein, DNA binding
Cold-shock protein {ECO:0000313|EMBL:KGE81166.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
SCN18_26_2_15_R1_P_scaffold_828_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4749..6392)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEZ3_MESCW
hypothetical protein
ABC transporter permease {ECO:0000313|EMBL:ESY99494.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCN18_26_2_15_R1_P_scaffold_828_8
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6684..8552)
DNA (1869bp) protein (623aa)
asparagine synthase (Glutamine-hydrolyzing) (EC:6.3.5.4)
UPI0003CE10FC related cluster n=1 Tax=unknown RepID=UPI0003CE10FC
Uncharacterized protein {ECO:0000313|EMBL:ESZ00067.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCN18_26_2_15_R1_P_scaffold_828_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8690..8956)
DNA (267bp) protein (89aa)
UPI0003CE5F87 related cluster n=1 Tax=unknown RepID=UPI0003CE5F87
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:ESY67704.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
flagellar biosynthetic protein FliQ
SCN18_26_2_15_R1_P_scaffold_828_10
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8985..9395)
DNA (411bp) protein (137aa)
Flagellar hook capping protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEZ5_MESCW
flagellar hook capping protein
Flagellar basal body rod modification protein FlgD {ECO:0000313|EMBL:ESZ29143.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCN18_26_2_15_R1_P_scaffold_828_11
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9400..9837)
DNA (438bp) protein (146aa)
UPI0003CEE3F8 related cluster n=1 Tax=unknown RepID=UPI0003CEE3F8
flagellar FlbT family protein
Probable flagellum biosynthesis repressor protein FlbT {ECO:0000256|HAMAP-Rule:MF_00783}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCN18_26_2_15_R1_P_scaffold_828_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9834..10181)
DNA (348bp) protein (116aa)
Flagellar FlaF family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9A0_MESOW
Flagellar biosynthesis regulatory protein FlaF {ECO:0000313|EMBL:CDX11418.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
flagellar FlaF family protein
SCN18_26_2_15_R1_P_scaffold_828_13
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10213..11262)
DNA (1050bp) protein (350aa)
Flagellar hook-associated protein FlgL n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEZ8_MESCW
flagellar hook-associated protein FlgL
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:ADV11089.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_26_2_15_R1_P_scaffold_828_14
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11266..12717)
DNA (1452bp) protein (484aa)
Flagellar hook-associated protein FlgK n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TFU8_MESCW
flagellar hook-associated protein FlgK
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:ADV11090.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_26_2_15_R1_P_scaffold_828_15
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12761..14017)
DNA (1257bp) protein (419aa)
Flagellar hook protein FlgE n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEI3_9RHIZ
Flagellar hook protein {ECO:0000313|EMBL:CDX11425.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
flgE; flagellar hook protein FlgE
SCN18_26_2_15_R1_P_scaffold_828_16
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14221..14889)
DNA (669bp) protein (223aa)
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI000380236D
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGB44445.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_26_2_15_R1_P_scaffold_828_17
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15082..15672)
DNA (591bp) protein (197aa)
Lytic transglycosylase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HSS6_9RHIZ
Lytic transglycosylase {ECO:0000313|EMBL:ESZ41517.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
lytic transglycosylase
SCN18_26_2_15_R1_P_scaffold_828_18
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15995..16999
DNA (1005bp) protein (335aa)
SCN18_26_2_15_R1_P_scaffold_828_19
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16882..18207)
DNA (1326bp) protein (442aa)
UPI0003CE36C3 related cluster n=1 Tax=unknown RepID=UPI0003CE36C3
Chemotaxis protein {ECO:0000313|EMBL:ESY67470.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCN18_26_2_15_R1_P_scaffold_828_20
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18204..19514)
DNA (1311bp) protein (437aa)
UPI0003CEFEBB related cluster n=1 Tax=unknown RepID=UPI0003CEFEBB
Flagellar motor protein MotB {ECO:0000313|EMBL:ESY78971.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
flagellar motor protein
SCN18_26_2_15_R1_P_scaffold_828_21
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19511..20140)
DNA (630bp) protein (210aa)
UPI0003CFA10E related cluster n=1 Tax=unknown RepID=UPI0003CFA10E
Uncharacterized protein {ECO:0000313|EMBL:ESZ29133.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCN18_26_2_15_R1_P_scaffold_828_22
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20144..21799)
DNA (1656bp) protein (552aa)
Flagellar M-ring protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YEJ0_9RHIZ
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
flagellar M-ring protein FliF
SCN18_26_2_15_R1_P_scaffold_828_23
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21947..22549)
DNA (603bp) protein (201aa)
UPI0003CEC710 related cluster n=1 Tax=unknown RepID=UPI0003CEC710
Flagellin C {ECO:0000313|EMBL:CDX31902.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
flagellin FlaA
Displaying 23 items

View Taxonomy