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SCN_reactora_scaffold_53994

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN_reactora_scaffold_53994_1
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..1027
DNA (1026bp) protein (342aa)
RHS repeat-associated core domain n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z4D9_ODOSD
RHS repeat-associated core domain
RHS repeat-associated core domain {ECO:0000313|EMBL:ADY32549.1}; Flags: Precursor;; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
SCN_reactora_scaffold_53994_2
unknown

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1041..1592
DNA (552bp) protein (184aa)

This feature has no annotations

SCN_reactora_scaffold_53994_3
unknown

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1666..2058
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Listeria innocua FSL J1-023 RepID=E3Z4K9_LISIO
SCN_reactora_scaffold_53994_4
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2339..3427
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X338_9PORP
Uncharacterized protein {ECO:0000313|EMBL:GAK38131.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
RHS repeat-associated core domain
SCN_reactora_scaffold_53994_5
unknown

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3450..4022
DNA (573bp) protein (191aa)

This feature has no annotations

SCN_reactora_scaffold_53994_6
unknown

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comp(4763..5113)
DNA (351bp) protein (117aa)

This feature has no annotations

SCN_reactora_scaffold_53994_7
unknown

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comp(5238..5531)
DNA (294bp) protein (98aa)

This feature has no annotations

SCN_reactora_scaffold_53994_8
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5874..6287
DNA (414bp) protein (138aa)
TonB protein, C-terminal domain protein n=1 Tax=Prevotella pleuritidis F0068 RepID=U2KY04_9BACT
TonB family domain-containing protein {ECO:0000313|EMBL:KKB45846.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
TonB family protein
SCN_reactora_scaffold_53994_9
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6359..6607)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Dysgonomonas mossii RepID=UPI00037DED52
Uncharacterized protein {ECO:0000313|EMBL:ETK02676.1}; TaxID=1411148 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 2.;"
hypothetical protein
SCN_reactora_scaffold_53994_10
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6620..7309)
DNA (690bp) protein (230aa)
Succinate dehydrogenase cytochrome b subunit n=1 Tax=Porphyromonas crevioricanis JCM 15906 RepID=T1DSI3_9PORP
Succinate dehydrogenase {ECO:0000313|EMBL:KGN90833.1}; TaxID=393921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas crevioricanis.;"
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
SCN_reactora_scaffold_53994_11
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(7314..7730)
DNA (417bp) protein (139aa)
Flavodoxin n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E0G9_METRM
flavodoxin
Flavodoxin {ECO:0000313|EMBL:ADC46215.1}; TaxID=634498 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM; 13430 / M1) (Methanobacterium ruminantium).;"
SCN_reactora_scaffold_53994_12
Prevotella ruminicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7740..8846)
DNA (1107bp) protein (369aa)
Putative Fe-S oxidoreductase n=1 Tax=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) RepID=D5ES21_PRER2
Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:ADE81403.1}; TaxID=264731 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23).;"
SCN_reactora_scaffold_53994_13
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8859..9341)
DNA (483bp) protein (161aa)
Glutathione peroxidase n=12 Tax=Leptospira interrogans RepID=G7QPD0_LEPII
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
btuE; glutathione peroxidase
SCN_reactora_scaffold_53994_14
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9615..10628)
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J142_9PORP
integral membrane sensor signal transduction histidine kinase
SCN_reactora_scaffold_53994_15
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10698..11360)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J143_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00786.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
two component transcriptional regulator
SCN_reactora_scaffold_53994_16
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11926..12273)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000379BA4F
Transposase {ECO:0000313|EMBL:KFF11871.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
uncharacterized protein
SCN_reactora_scaffold_53994_17
unknown

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comp(12906..13034)
DNA (129bp) protein (43aa)

This feature has no annotations

SCN_reactora_scaffold_53994_18
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13125..17462)
DNA (4338bp) protein (1446aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1ILS6_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ44538.1}; Flags: Precursor;; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
hypothetical protein
SCN_reactora_scaffold_53994_19
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17532..18215)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Myroides odoratimimus RepID=K1HGD2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO15182.1}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP 101113.;"
hypothetical protein
SCN_reactora_scaffold_53994_20
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19150..20406)
DNA (1257bp) protein (419aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXA3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02086.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
outer membrane efflux protein
SCN_reactora_scaffold_53994_21
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20393..23494)
DNA (3102bp) protein (1034aa)
membrane protein n=1 Tax=Bacteroides propionicifaciens RepID=UPI00037BD481
Uncharacterized protein {ECO:0000313|EMBL:EGK02085.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
cation efflux system protein
SCN_reactora_scaffold_53994_22
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23502..24605)
DNA (1104bp) protein (368aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Bacteroides sp. D2 RepID=E5CDX5_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFS33290.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
cation efflux system protein
SCN_reactora_scaffold_53994_23
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24620..24772)
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02083.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCN_reactora_scaffold_53994_24
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24793..27447)
DNA (2655bp) protein (885aa)
Magnesium-translocating P-type ATPase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IX99_9PORP
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:EGK02082.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Mg2+ transport ATPase protein B
SCN_reactora_scaffold_53994_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27587..28957)
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1H7E1_BACFG
two-component system sensor histidine kinase
SCN_reactora_scaffold_53994_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28941..29639)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FMU5_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA82325.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
two-component system response regulator
SCN_reactora_scaffold_53994_27
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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30332..33424
DNA (3093bp) protein (1031aa)
PKD domain containing protein id=3788477 bin=GWA2_Bacteroidetes_42_15 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCN_reactora_scaffold_53994_28
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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33438..34163
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X4T2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04771.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
Displaying 28 items

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