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scn_reactorb_scaffold_138100

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_138100_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..106
DNA (105bp) protein (35aa)
Integrase catalytic region n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYS7_THIK1
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ADG30479.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
scn_reactorb_scaffold_138100_2
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(498..818)
DNA (321bp) protein (107aa)
Nucleoid protein H-NS n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFJ3_METPP
nucleoid protein H-NS
H-NS histone family protein {ECO:0000313|EMBL:EWS56985.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
scn_reactorb_scaffold_138100_3
unknown

Not on your lists

comp(1210..2814)
DNA (1605bp) protein (535aa)

This feature has no annotations

scn_reactorb_scaffold_138100_4
Bacillus pumilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3863..5071
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Escherichia coli KOEGE 68 (182a) RepID=T8I2R1_ECOLX
mob; mobilization protein
Glutamyltransferase {ECO:0000313|EMBL:AAS46254.1}; TaxID=1408 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus pumilus (Bacillus mesentericus).;"
scn_reactorb_scaffold_138100_5
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5068..6828)
DNA (1761bp) protein (587aa)
Integrase n=1 Tax=Vibrio mimicus VM223 RepID=D0HF04_VIBMI
Uncharacterized protein {ECO:0000313|EMBL:KJA10302.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scn_reactorb_scaffold_138100_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7312..7986)
DNA (675bp) protein (225aa)
phosphoglycolate phosphatase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002374FD2
phosphoglycolate phosphatase
Tax=GWA2_Burkholderiales_64_37_curated
scn_reactorb_scaffold_138100_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7986..8696)
DNA (711bp) protein (237aa)
bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I028_9BURK
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_138100_trna_1
unknown

Not on your lists

comp(9119..9191)
DNA (73bp)
transferRNA Lys
scn_reactorb_scaffold_138100_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9246..10022)
DNA (777bp) protein (259aa)
UBA/THIF-type NAD/FAD-binding protein id=12550551 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
UBA/THIF-type NAD/FAD-binding protein
UBA/THIF-type NAD/FAD-binding protein {ECO:0000313|EMBL:AFU45847.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_138100_9
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10019..10789)
DNA (771bp) protein (257aa)
Tol-pal system protein YbgF n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q770_ACIAP
tol-pal system protein YbgF
Tol-pal system protein YbgF {ECO:0000313|EMBL:ADX45745.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_138100_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10789..11325)
DNA (537bp) protein (179aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Q9_9BURK
peptidoglycan-associated lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:AFU45845.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_138100_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11373..12689)
DNA (1317bp) protein (439aa)
Protein TolB n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3T0_9BURK
tolB; translocation protein TolB
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_138100_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12811..14598
DNA (1788bp) protein (596aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4N6_ACIDE
lipid a ABC transporter ATPase/inner membrane protein
scn_reactorb_scaffold_138100_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14661..15332)
DNA (672bp) protein (224aa)
ankyrin id=12550545 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ankyrin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scn_reactorb_scaffold_138100_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15329..16153)
DNA (825bp) protein (275aa)
Hydrolase, TatD family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4N8_ACIDE
Hydrolase, TatD family {ECO:0000313|EMBL:EER60573.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
TatD family hydrolase
scn_reactorb_scaffold_138100_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16192..16551)
DNA (360bp) protein (120aa)
Type IV pilus assembly pilz n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Q5_9BURK
type IV pilus assembly pilz
Type IV pilus assembly pilz {ECO:0000313|EMBL:AFU45840.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_138100_16
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16570..17565)
DNA (996bp) protein (332aa)
DNA-directed DNA polymerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3S6_9BURK
DNA polymerase {ECO:0000313|EMBL:KJA12504.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
DNA-directed DNA polymerase
scn_reactorb_scaffold_138100_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17562..18218)
DNA (657bp) protein (219aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Thymidylate kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUW9_ALIDB
scn_reactorb_scaffold_138100_18
unknown

Not on your lists

comp(18220..18387)
DNA (168bp) protein (56aa)

This feature has no annotations

scn_reactorb_scaffold_138100_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18384..19373)
DNA (990bp) protein (330aa)
Aminodeoxychorismate lyase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY39_9BURK
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AFU45837.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_138100_20
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19422..20327
DNA (906bp) protein (302aa)
folate-binding protein n=1 Tax=Acidovorax avenae RepID=UPI0002E39FA6
Glycine cleavage T protein (Aminomethyl transferase) {ECO:0000313|EMBL:EHL20846.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
glycine cleavage T protein (aminomethyl transferase)
scn_reactorb_scaffold_138100_21
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20337..22907)
DNA (2571bp) protein (857aa)
TonB-dependent siderophore receptor n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YFW1_9RHOO
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ENO90375.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
Fe(3+)-pyochelin receptor
scn_reactorb_scaffold_138100_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22999..23880)
DNA (882bp) protein (294aa)
Anti-sigma factor protein, FecR family n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DXX6_PSEMN
FecR family anti-sigma factor protein
Anti-sigma factor protein, FecR family {ECO:0000313|EMBL:AEB56328.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
scn_reactorb_scaffold_138100_23
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23880..24419)
DNA (540bp) protein (180aa)
RNA polymerase sigma factor, FecI family n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DXX5_PSEMN
FecI family RNA polymerase sigma factor
RNA polymerase sigma factor, FecI family {ECO:0000313|EMBL:AEB56327.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
scn_reactorb_scaffold_138100_24
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24631..25884
DNA (1254bp) protein (418aa)
sodium:proton antiporter n=1 Tax=Cupriavidus sp. WS RepID=UPI00036DD68C
Sodium:proton antiporter {ECO:0000313|EMBL:KDP83353.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
Na+/H+ antiporter NhaP
scn_reactorb_scaffold_138100_25
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25957..26823)
DNA (867bp) protein (289aa)
Thioesterase superfamily protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MA74_ACIET
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACM33446.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_138100_26
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26828..27748)
DNA (921bp) protein (307aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4K9_ACIDE
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:EER60581.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
alpha/beta hydrolase domain-containing protein
scn_reactorb_scaffold_138100_27
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27861..28730)
DNA (870bp) protein (290aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4L0_ACIDE
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EER60582.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hydratase/decarboxylase
scn_reactorb_scaffold_138100_28
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28792..29928
DNA (1137bp) protein (379aa)
Alcohol dehydrogenase, class IV n=1 Tax=Acidovorax sp. CF316 RepID=J1EMV8_9BURK
4-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KJA12489.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
iron-containing alcohol dehydrogenase
scn_reactorb_scaffold_138100_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30013..30837)
DNA (825bp) protein (275aa)
UPI00039CB44C related cluster n=1 Tax=unknown RepID=UPI00039CB44C
Putative signal transduction protein {ECO:0000313|EMBL:GAD22132.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
signal transduction protein
Displaying items 1-30 of 67 in total

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