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scn_reactorb_scaffold_35772_26

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(27998..29053)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Variovorax sp. CF313 RepID=J2KQC6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 350.0
  • Bit_score: 297
  • Evalue 1.80e-77
PAS domain S-box {ECO:0000313|EMBL:EJL75263.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 350.0
  • Bit_score: 297
  • Evalue 2.50e-77
two component transcriptional regulator, sensor histidine kinase similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 350.0
  • Bit_score: 294
  • Evalue 3.20e-77

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGCCCCCGCCACCGCCGCAGCCCATTGGCCACTATGCGGGCCTTTCGTTCGAGGCCATCGTCGAGCAATCCATCACCGGCATCTACGTGCTGCAGGACGAGGTGTTCGTCTATTCCAACGAAACCTGGGCACAATTCTTCGGCCTGCGCGCCAGCGAGATCACCCGCATGTCCCTGCGCGACCTGGTGCCCGCGCCCTACATCGACAAGGTGCGGGAGATGTACCACCTGCGCGTGACGGGCGCGGTGGACAGCCTGCGCTACGTGACCCCGGCGGTGCACAAGGACGGGCACCTCATCTACCTGGAGGTGCACGGCATGCGCATGCAGTACCGCGGCCGCAACGCCGTGGCGGGCGTGGGCATCGACATCACCGAACAGGTGCGGCGCGAGGATGACCTGCGCCAGGCGCGCACCGAGTTGCAGCAGCTGGCCGCGCACATCAACCAGGAGCGCGAGCGCCAGCGCGCCCTGTACGCACGCGAGCTGCACGACGTGCTGGGCGGGCTGCTGGCGTCGATGAAGCTGAACACCCAGCGCATCCTGCGCCGCGCCGACACGCAGGAACTCAAGGAAATCGCCTCCGACCTGATGCAGATGACGCGCCAGGCCATCCAGAGCGTGCGCGAGATGTCCGAGGAACTGCGCCCCAGCGGCCTGGACCACCTCGGGCTGGCCGCCACCATGCAGCGCGAGCTGCAGCGCTTCGCCGCGCGGCACGCGCTGCAATGCGCGTGGCATGGCCCCATCCAGCGCCCGGACATGGACATCGACCGCGCCACCAGCGTCTTTCGCATCTTCCAGGAAGCGCTGACCAACGTCGCCAAGCACGCGCAGGCGCGCCACGTCGCGGTGCGCCTGTCGCACGGCGATGCCGCGCTGTCGCTGGAGATCGAGGACGATGGCGTAGGCCTGGGCGAGCCCCCCCACCGCTGCGACGCGCGCGGCCTGCTGGGCATGCGCGAACGCGCCCGCGAGCTGAACGGCACGCTGGACCTGCAGGCCATCGCGGGCCGGGGCACGCGGCTCCACCTTTGCGTTCCCATGCAGCCATGA
PROTEIN sequence
Length: 352
MPPPPPQPIGHYAGLSFEAIVEQSITGIYVLQDEVFVYSNETWAQFFGLRASEITRMSLRDLVPAPYIDKVREMYHLRVTGAVDSLRYVTPAVHKDGHLIYLEVHGMRMQYRGRNAVAGVGIDITEQVRREDDLRQARTELQQLAAHINQERERQRALYARELHDVLGGLLASMKLNTQRILRRADTQELKEIASDLMQMTRQAIQSVREMSEELRPSGLDHLGLAATMQRELQRFAARHALQCAWHGPIQRPDMDIDRATSVFRIFQEALTNVAKHAQARHVAVRLSHGDAALSLEIEDDGVGLGEPPHRCDARGLLGMRERARELNGTLDLQAIAGRGTRLHLCVPMQP*