ggKbase home page

scn_reactorb_scaffold_35772

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_35772_1
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(113..1204)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034848F0
Uncharacterized protein {ECO:0000313|EMBL:KJF44233.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
ATPase
scn_reactorb_scaffold_35772_2
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1217..2413)
DNA (1197bp) protein (399aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Cytosine-specific methyltransferase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L006_OSCVS
putative methyltransferase
scn_reactorb_scaffold_35772_3
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2450..3727)
DNA (1278bp) protein (426aa)
Putative methyltransferase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L007_OSCVS
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAL01388.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
scn_reactorb_scaffold_35772_4
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(3848..4045)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000381D287
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
scn_reactorb_scaffold_35772_5
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4565..6928
DNA (2364bp) protein (788aa)
TonB-dependent receptor n=1 Tax=Escherichia albertii RepID=UPI0002BB5664
TonB-dependent siderophore receptor {ECO:0000313|EMBL:AKF50220.1}; TaxID=1324932 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. syringae HS191.;"
TonB-dependent siderophore receptor
scn_reactorb_scaffold_35772_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7118..8167
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000370A6A8
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ACF01064.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
scn_reactorb_scaffold_35772_7
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8164..9249
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003750084
transport system permease
Transport system permease protein {ECO:0000313|EMBL:ACK52358.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scn_reactorb_scaffold_35772_8
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9246..10025
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000377B5E9
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACK52357.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scn_reactorb_scaffold_35772_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10555..10893)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W7F1_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42176.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_35772_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11407..12447)
DNA (1041bp) protein (347aa)
UPI0003D3BCC2 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3BCC2
Uncharacterized protein {ECO:0000313|EMBL:GAD24752.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
heat shock protein DnaJ domain-containing protein
scn_reactorb_scaffold_35772_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12705..13097
DNA (393bp) protein (131aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRQ7_COMTE
Putative protein-S-isoprenylcysteine methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EED67242.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
scn_reactorb_scaffold_35772_12
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13516..14739
DNA (1224bp) protein (408aa)
cytochrome C peroxidase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B71817
Cytochrome C peroxidase {ECO:0000313|EMBL:KIF83814.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
cytochrome C peroxidase
scn_reactorb_scaffold_35772_13
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14800..16164
DNA (1365bp) protein (455aa)
porin n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034BAA53
Uncharacterized protein {ECO:0000313|EMBL:KIF82136.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
scn_reactorb_scaffold_35772_14

Not on your lists

16164..16712
DNA (549bp) protein (183aa)
FMN-binding protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348B74F
FMN-binding domain protein {ECO:0000313|EMBL:AIA12668.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FMN-binding domain protein
scn_reactorb_scaffold_35772_15

Not on your lists

16768..17514
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348564E
ApbE family {ECO:0000313|EMBL:AIA12667.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
apbE family protein
scn_reactorb_scaffold_35772_16
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17511..17972
DNA (462bp) protein (154aa)
membrane protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B75DC
Uncharacterized protein {ECO:0000313|EMBL:KGM40794.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
conserved membrane protein of unknown function
scn_reactorb_scaffold_35772_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17965..18288
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F6005
cuta1 divalent ion tolerance protein
Uncharacterized protein {ECO:0000313|EMBL:GAD23661.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scn_reactorb_scaffold_35772_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18359..19471)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F71
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_35772_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19528..22182)
DNA (2655bp) protein (885aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI0002377F72
sensory box protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scn_reactorb_scaffold_35772_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22275..23333)
DNA (1059bp) protein (353aa)
Signal recognition particle receptor FtsY n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1B7_ALIDB
signal recognition particle-docking protein ftsy
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_35772_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23361..24806
DNA (1446bp) protein (482aa)
Peptidase M16 domain protein n=2 Tax=cellular organisms RepID=A9BUY0_DELAS
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ABX34442.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scn_reactorb_scaffold_35772_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24848..26167
DNA (1320bp) protein (440aa)
Peptidase M16 domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1B5_ALIDB
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AEB83394.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_35772_23
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26164..26763
DNA (600bp) protein (200aa)
Methyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T954_ACIDE
Methyltransferase {ECO:0000313|EMBL:EER58986.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
methyltransferase
scn_reactorb_scaffold_35772_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26838..27332
DNA (495bp) protein (165aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365357C
scn_reactorb_scaffold_35772_25
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27366..28001)
DNA (636bp) protein (212aa)
Two-component system response regulator n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZZ3_AROAE
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:CAI09371.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
scn_reactorb_scaffold_35772_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27998..29053)
DNA (1056bp) protein (352aa)
PAS domain S-box n=1 Tax=Variovorax sp. CF313 RepID=J2KQC6_9BURK
PAS domain S-box {ECO:0000313|EMBL:EJL75263.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
two component transcriptional regulator, sensor histidine kinase
scn_reactorb_scaffold_35772_27
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29115..30635)
DNA (1521bp) protein (507aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TA8_RHOFD
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABD70995.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
scn_reactorb_scaffold_35772_28
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30677..31633)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003752F72
porin
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
scn_reactorb_scaffold_35772_29
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31704..33335)
DNA (1632bp) protein (544aa)
AMP-dependent synthetase/ligase (EC:6.2.1.26)
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABB11502.1}; EC=6.2.1.26 {ECO:0000313|EMBL:ABB11502.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
AMP-dependent synthetase and ligase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q396V9_BURS3
scn_reactorb_scaffold_35772_30
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33598..34482
DNA (885bp) protein (295aa)
Lysophospholipase (EC:3.1.1.5 3.1.1.23)
Hydrolase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PCB5_9BURK
Alpha/beta hydrolase {ECO:0000313|EMBL:KFL55824.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
Displaying items 1-30 of 103 in total

View Taxonomy