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scn_reactorb_scaffold_138100_30

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(30907..33285)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6M2_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 799.0
  • Bit_score: 1448
  • Evalue 0.0
RNA binding S1 domain protein {ECO:0000313|EMBL:ABM41897.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 799.0
  • Bit_score: 1448
  • Evalue 0.0
RNA-binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 799.0
  • Bit_score: 1448
  • Evalue 0.0

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2379
ATGCAGCAAATCGTCCGGCAGTTGGCCGCAGAAATCAAGATTACCGAATCCCAGGTGCGCTCCGCCGTGGAGCTGCTCGACGGCGGGGCCACCGTGCCCTTCATCGCGCGCTACCGCAAGGAGGTGACCGGCGGCCTGGACGATGTGCAGCTGCGCGAGCTGGAGGCGCGCCTGGCCTACCTGCGCGAGCTGGAAGAGCGCCGCGTGAGCGTGCTCAAGGCGATCGACGAGCAGGGCAAGCTGACCGATGCCCTGCGCGCGCAGATCGCCGCCGCGCCGACCAAGCAGGAGCTGGAGGACATCTACCTGCCCTTCAAGCAAAAGCGCCGCACCAAGGGCCAGATCGCGCGCGAATTTGGCATCGAGCCGCTGGCCGACAAGCTGCTGGCCGATCCGGCGCTGGATCCGCACGCCGAGGCACAGGCCTTCTGCCAGCCCGCCACCACGCTCGACGACGGCAAGCCGGGGCCGGATTTCTCGACCACCTTCGCCGTGCTCGACGGCGTGCGCGACATCCTCTCCGAGCGCTGGGCCGAGGACGCCGTGCTGGTGCAGTCGCTGCGCGAATGGCTGTGGGCCGAGGGGCTGCTGCGCTCCAAGAAGGTCGAGGGCAAGAACGAGAACGACCCCGAGGTGGCCAAGTTCCGCGACTACTTCGAGTACGACGAACCGATTGGCCGCGTGCCCTCGCACCGTGCGCTGGCGGTGTTCCGCGGCCGCGCGCTGGAGATTCTGGAAGCCAAGCTGGTGCTGCCCGTGGAGCCCGAGCCGGGCCAGCCCAGCATCGCCGAAGGCCGCATCGCCCTGCACCTGGGCTGGAGCCACGCGGGCCGCAAGAGCGACGACCTGCTGCGCAAGTGCGTGGCCTGGACCTGGCGCGTGAAGCTCAGCCTCTCGACCGAACGCGACCTGTTCTCGCGCCTGCGCGAAGAGGCCGAGAAGGTGGCCATCAAGGTCTTCGCCGACAACCTGCGCGACCTGCTGCTGGCCGCACCCGCCGGCCCGCGCGCCGTGATGGGGCTGGACCCAGGCATCCGCACCGGCGTCAAGGTGGCCGTGGTGGACCGCACCGGCAAGCTGGTGGAGACCGCCACCGTCTACCCGCACGAGCCGCGCCGCGACTGGGACGGCAGCTTGGCCGTGCTGGGCCGCCTGTGCATGAAGCATGGCGTGCAGCTCATCGCCATCGGCAACGGCACGGCCAGCCGCGAGACCGACAAGCTCGCTGCCGACCTCATCAAATTGATGCAAAAACAGGCCTCGGACCCTGCGGGGCAAGCGCTGCCAGCTATTGAAAAGATAGTGGTGAGCGAGGCCGGCGCCTCGGTCTACAGCGCCAGCGAATACGCCTCGCAGGAAATGCCCGACGTGGACGTGAGCCTGCGCGGCGCCGCCAGCATCGCGCGCCGCCTGCAGGACCCGCTGGCCGAGCTGGTGAAGATCGAGCCCAAGAGCATCGGCGTCGGCCAGTACCAGCACGACGTGAACCAGAGCGAGCTGGCGCGCACGCTGGATGCCGTGGTCGAGGACTGCGTGAACTCCGTCGGCGTTGACCTGAACACCGCCAGCGTGCCGCTGCTGTCGCGGGTGTCGGGCCTGTCGGGCAGCGTGGCCAAGTCGGTGGTGCGCTGGCGCGAGTCCAACGGCGCGTTCAGGAGCCGCAAGCAGCTCATGGAAGTCAGCGGCCTGGGCGCCAAGACCTTCGAGCAGGCGGCGGGCTTCCTGCGCATCCGCGACGGCGAGAACCCGCTGGACATGACCGGCGTGCACCCCGAGACCTACCCCGTGGTGCAGCAGATCATCGAGAAGACCGGCAAGCCCGTGGCCGAGCTGATGGGCCGCGCCGACATGCTCAAGACCCTGCGCCCCGAGCTGTTTGCCAGCGAGAAATTCGGCCCCATCACGGTGAAGGACATCCTGGCCGAGCTGGAAAAGCCCGGCCGCGACCCGCGCCCCGACTTCAAGGTGGCGCGCTTCAACGAGGGCGTGGAAGACATCGCCGACCTCAAGGAAGGCATGGTGCTGGAGGGCACGGTGAGCAACGTGGCGCAGTTCGGCGCCTTCGTCGACCTGGGCGTGCACCAGGACGGGCTGGTGCACGTGAGCCAGTTGGCCAACAAGTTCGTGAGCGACGCGCGCGAGGTGGTCAAGACCGGGCAGATCGTCAAGGTGAAGGTGCTGGAGGTGGACGCGGCGCGCAAGCGCATCAGCCTGACCATGCGGCTCGACGCCACCCCCGCGCGCCGCGACGGGCCGCGCGACAACCGCTTCGAGGGCGCGGGCCGCGGCTACGCCGCGCCGCAGCGCCGCACGAACGAGCCCGCGCCGCAGGGCGCCATGGCCTCGGCATTCGCCAAGCTGCAACAGCGCGGGCGCTGA
PROTEIN sequence
Length: 793
MQQIVRQLAAEIKITESQVRSAVELLDGGATVPFIARYRKEVTGGLDDVQLRELEARLAYLRELEERRVSVLKAIDEQGKLTDALRAQIAAAPTKQELEDIYLPFKQKRRTKGQIAREFGIEPLADKLLADPALDPHAEAQAFCQPATTLDDGKPGPDFSTTFAVLDGVRDILSERWAEDAVLVQSLREWLWAEGLLRSKKVEGKNENDPEVAKFRDYFEYDEPIGRVPSHRALAVFRGRALEILEAKLVLPVEPEPGQPSIAEGRIALHLGWSHAGRKSDDLLRKCVAWTWRVKLSLSTERDLFSRLREEAEKVAIKVFADNLRDLLLAAPAGPRAVMGLDPGIRTGVKVAVVDRTGKLVETATVYPHEPRRDWDGSLAVLGRLCMKHGVQLIAIGNGTASRETDKLAADLIKLMQKQASDPAGQALPAIEKIVVSEAGASVYSASEYASQEMPDVDVSLRGAASIARRLQDPLAELVKIEPKSIGVGQYQHDVNQSELARTLDAVVEDCVNSVGVDLNTASVPLLSRVSGLSGSVAKSVVRWRESNGAFRSRKQLMEVSGLGAKTFEQAAGFLRIRDGENPLDMTGVHPETYPVVQQIIEKTGKPVAELMGRADMLKTLRPELFASEKFGPITVKDILAELEKPGRDPRPDFKVARFNEGVEDIADLKEGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLANKFVSDAREVVKTGQIVKVKVLEVDAARKRISLTMRLDATPARRDGPRDNRFEGAGRGYAAPQRRTNEPAPQGAMASAFAKLQQRGR*