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SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

SCN_bioreactor_inoc_reactorb_Burkholderiales_68_25
In projects: 2019_SCN_bioreactor_inoc_reactorb  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 85 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scn_reactorb_scaffold_49008
Order: Burkholderiales (90%)
20 16334 bp 61.20 24.26 87.76
scn_reactorb_scaffold_48863
Order: Burkholderiales (88.57%)
35 37934 bp 68.88 26.13 92.08
scn_reactorb_scaffold_47408
Genus: Acidovorax (57.14%)
42 48705 bp 69.45 25.08 92.96
scn_reactorb_scaffold_28547
Species: Acidovorax sp. MR-S7 (56.25%)
16 18920 bp 72.08 22.89 92.09
scn_reactorb_scaffold_27856
Genus: Acidovorax (50%)
32 30374 bp 67.36 24.33 86.39
scn_reactorb_scaffold_25275
Genus: Acidovorax (52.5%)
40 57381 bp 71.63 25.23 95.26
scn_reactorb_scaffold_147907
Genus: Acidovorax (100%)
7 8879 bp 70.62 24.46 93.46
scn_reactorb_scaffold_40108
Order: Burkholderiales (87.5%)
16 18424 bp 65.84 25.42 88.58
scn_reactorb_scaffold_39976
Genus: Acidovorax (55.17%)
29 26688 bp 66.94 25.71 88.03
scn_reactorb_scaffold_39970
Order: Burkholderiales (85.14%)
249 270619 bp 69.49 24.22 91.71
scn_reactorb_scaffold_38595
Order: Burkholderiales (64.41%)
59 65438 bp 69.68 24.11 94.17
scn_reactorb_scaffold_23585
Order: Burkholderiales (85.71%)
7 6332 bp 62.90 28.64 69.93
scn_reactorb_scaffold_20309
Order: Burkholderiales (88.1%)
42 48532 bp 69.48 23.66 89.37
scn_reactorb_scaffold_153145
Species: Castellaniella defragrans (100%)
2 1436 bp 63.79 22.77 95.47
scn_reactorb_scaffold_88414
Order: Burkholderiales (84.21%)
38 39192 bp 70.97 24.94 92.67
scn_reactorb_scaffold_19794
Genus: Acidovorax (59.26%)
27 38400 bp 70.49 24.52 89.37
scn_reactorb_scaffold_19788
Genus: Acidovorax (58.82%)
34 35998 bp 69.48 25.52 91.24
scn_reactorb_scaffold_19608
Order: Burkholderiales (83.33%)
12 9917 bp 63.05 25.32 79.50
scn_reactorb_scaffold_19069
Order: Burkholderiales (77.61%)
67 77033 bp 65.80 24.12 90.14
scn_reactorb_scaffold_17052
Order: Burkholderiales (89.63%)
347 386521 bp 69.32 25.30 92.68
scn_reactorb_scaffold_16920
Genus: Acidovorax (63.64%)
11 12024 bp 67.41 29.25 89.95
scn_reactorb_scaffold_16692
Order: Burkholderiales (78.95%)
19 14802 bp 69.00 27.61 97.49
scn_reactorb_scaffold_16589
Species: Acidovorax ebreus (100%)
1 1734 bp 66.96 27.85 99.83
scn_reactorb_scaffold_120436
Order: Burkholderiales (87.8%)
41 45809 bp 68.95 24.55 91.09
scn_reactorb_scaffold_118126
Genus: Acidovorax (51.67%)
269 291583 bp 69.24 25.38 92.71
scn_reactorb_scaffold_116778
Genus: Acidovorax (52.03%)
148 171152 bp 69.86 25.47 92.45
scn_reactorb_scaffold_72814
Order: Burkholderiales (88.68%)
53 40477 bp 59.78 22.76 88.44
scn_reactorb_scaffold_72001
Order: Burkholderiales (84.75%)
59 67464 bp 65.36 23.57 91.76
scn_reactorb_scaffold_71788
Order: Burkholderiales (93.33%)
15 12976 bp 67.09 23.14 90.84
scn_reactorb_scaffold_97926
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 1093 bp 65.14 25.25 69.72
scn_reactorb_scaffold_7189
Order: Burkholderiales (81.48%)
27 38407 bp 62.81 23.46 88.47
scn_reactorb_scaffold_6725
Genus: Acidovorax (51.65%)
242 247058 bp 66.67 24.15 88.62
scn_reactorb_scaffold_5873
Order: Burkholderiales (80%)
25 23670 bp 63.84 24.96 84.41
scn_reactorb_scaffold_5724
Order: Burkholderiales (88.32%)
137 174661 bp 70.13 25.52 93.11
scn_reactorb_scaffold_5580
Genus: Acidovorax (51.69%)
89 101235 bp 69.78 25.65 94.27
scn_reactorb_scaffold_5488
Genus: Acidovorax (51.49%)
101 114534 bp 68.94 24.71 93.09
scn_reactorb_scaffold_5360
Order: Burkholderiales (86.92%)
107 103136 bp 66.27 24.44 89.49
scn_reactorb_scaffold_5044
Species: RLO_Burkholderiales_65_40 (66.67%)
6 12808 bp 70.40 21.13 94.72
scn_reactorb_scaffold_4422
Order: Burkholderiales (80.98%)
184 193803 bp 68.24 24.66 90.16
scn_reactorb_scaffold_138100
Order: Burkholderiales (70.15%)
67 78814 bp 64.35 24.26 89.39
scn_reactorb_scaffold_64800
Order: Burkholderiales (86.96%)
46 50824 bp 66.76 24.03 82.73
scn_reactorb_scaffold_87150
Order: Burkholderiales (50%)
10 7247 bp 65.49 27.92 82.92
scn_reactorb_scaffold_32272
Order: Burkholderiales (84.44%)
45 51874 bp 69.42 25.75 89.29
scn_reactorb_scaffold_29678
Order: Burkholderiales (83.33%)
6 4400 bp 67.32 27.31 80.86
scn_reactorb_scaffold_162144
Class: Betaproteobacteria (66.67%)
3 2631 bp 67.46 21.78 93.96
scn_reactorb_scaffold_161999
Species: Acidovorax sp. MR-S7 (100%)
1 1078 bp 65.49 30.19 89.05
scn_reactorb_scaffold_164982
Species: Cupriavidus metallidurans (100%)
1 1030 bp 66.70 21.70 27.67
scn_reactorb_scaffold_163954
Order: Burkholderiales (100%)
12 12613 bp 61.45 27.90 85.96
scn_reactorb_scaffold_2650
Genus: Acidovorax (51.72%)
29 41561 bp 65.25 24.94 93.77
scn_reactorb_scaffold_2612
Order: Burkholderiales (70.69%)
58 62556 bp 59.79 21.76 85.96
Displaying items 1-50 of 85 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.