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SCN18_26_2_15_R2_B_scaffold_5145

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_5145_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..269)
DNA (267bp) protein (89aa)
Transcriptional regulator, MarR family (Modular protein) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JE93_HYPSM
MarR family transcriptional regulator
Transcriptional regulator, MarR family (Modular protein) {ECO:0000313|EMBL:CCB65301.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_5145_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(426..1046)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JE92_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65300.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_5145_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1043..2242)
DNA (1200bp) protein (400aa)
ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12)
Bifunctional enzyme IspD/IspF n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDL8_HYPSM
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_5145_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2529..3515
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
tRNA-dihydrouridine synthase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDL7_HYPSM
dusB; tRNA-dihydrouridine synthase B
SCN18_26_2_15_R2_B_scaffold_5145_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3512..4678
DNA (1167bp) protein (389aa)
glnL; sensory histdine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Sensory histdine kinase (Soluble) in two-component regulatory system with GlnG, nitrogen regulation (Nitrogen regulator II, NRII) Domains: HK homodimeric, ATPase and PAS n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDL6_HYPSM
SCN18_26_2_15_R2_B_scaffold_5145_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4678..6123
DNA (1446bp) protein (482aa)
Two-component sigma-54 specific nitrogen transcriptional regulator, Fis subfamily N-terminal response receiver n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7H8_HYPSM
glnG; two-component sigma-54 specific nitrogen transcriptional regulator
Two-component sigma-54 specific nitrogen transcriptional regulator, Fis subfamily N-terminal response receiver {ECO:0000313|EMBL:CCB65296.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Displaying 6 items

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