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SCN18_26_2_15_R2_B_scaffold_2971

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_2971_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..268)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFH7_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB67933.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2971_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(335..1768)
DNA (1434bp) protein (478aa)
atpD; ATP synthase F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347, ECO:0000313|EMBL:CCB67932.1};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
ATP synthase subunit beta n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFH6_HYPSM
SCN18_26_2_15_R2_B_scaffold_2971_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1791..2195)
DNA (405bp) protein (135aa)
Organic hydroperoxide resistance protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFH5_HYPSM
ohr; Organic hydroperoxide resistance protein
Organic hydroperoxide resistance protein {ECO:0000313|EMBL:CCB67931.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2971_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2211..3095)
DNA (885bp) protein (295aa)
atpG; ATP synthase F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFH4_HYPSM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2971_5
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3121..4650)
DNA (1530bp) protein (510aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
ATP synthase subunit alpha n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BI75_9RHIZ
SCN18_26_2_15_R2_B_scaffold_2971_6
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4758..5345)
DNA (588bp) protein (196aa)
atpH; ATP synthase F1 subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFH2_HYPSM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2971_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5748..6131)
DNA (384bp) protein (128aa)
UPF0102 protein HYPMC_4719 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFH1_HYPSM
hypothetical protein
UPF0102 protein HYPMC_4719 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2971_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6128..7060)
DNA (933bp) protein (311aa)
rmsL; ribosomal RNA small subunit methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Ribosomal RNA small subunit methyltransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFH0_HYPSM
SCN18_26_2_15_R2_B_scaffold_2971_9
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7236..7646)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFG9_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB67925.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2971_10
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7891..8751)
DNA (861bp) protein (287aa)
glutamyl-tRNA synthetase (EC:6.1.1.17)
Putative glutamyl-tRNA synthetase {ECO:0000313|EMBL:CCB67924.1}; EC=6.1.1.17 {ECO:0000313|EMBL:CCB67924.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putative glutamyl-tRNA synthetase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFG8_HYPSM
SCN18_26_2_15_R2_B_scaffold_2971_11
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8751..9275)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003671F87
SCN18_26_2_15_R2_B_scaffold_2971_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9351..9917
DNA (567bp) protein (189aa)
HhH-GPD family protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFG5_HYPSM
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:CCB67921.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Displaying 12 items

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