ggKbase home page

SCN18_26_2_15_R2_B_scaffold_8669

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_8669_1
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64..543)
DNA (480bp) protein (160aa)
Cytochrome c class I n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JXT6_HYPDA
cytochrome C class I
Cytochrome c class I {ECO:0000313|EMBL:ADJ23295.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_26_2_15_R2_B_scaffold_8669_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(718..1878)
DNA (1161bp) protein (387aa)
Coenzyme PQQ synthesis protein E n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8U9_HYPSM
pqqE; Pyrroloquinoline quinone (PQQ) biosynthesis protein E
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_8669_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1910..2212)
DNA (303bp) protein (101aa)
Coenzyme PQQ synthesis D n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4I5_9RHIZ
coenzyme PQQ synthesis D
Coenzyme PQQ synthesis D {ECO:0000313|EMBL:AGK57918.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_8669_4
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2216..2992)
DNA (777bp) protein (259aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinoline quinone biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Pyrroloquinoline-quinone synthase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B6S0_9RHIZ
pyrroloquinoline quinone biosynthesis protein PqqC
SCN18_26_2_15_R2_B_scaffold_8669_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2989..3921)
DNA (933bp) protein (311aa)
Pyrroloquinoline quinone (PQQ) biosynthesis protein B n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8V2_HYPSM
pqqB; Pyrroloquinoline quinone (PQQ) biosynthesis protein B
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653, ECO:0000256|SAAS:SAAS00055095}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Displaying 5 items

View Taxonomy