ggKbase home page

SCN18_30_10_14_R2_B_scaffold_4382

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4382_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)
Exopolysaccharide transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV03_9RHIZ
Exopolysaccharide transporter {ECO:0000313|EMBL:EHK55401.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
succinoglycan transport protein exoP
SCN18_30_10_14_R2_B_scaffold_4382_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

372..935
DNA (564bp) protein (188aa)
Polysaccharide export protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11J73_MESSB
polysaccharide export protein
Polysaccharide export protein {ECO:0000313|EMBL:ABG62552.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_30_10_14_R2_B_scaffold_4382_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1081..2616
DNA (1536bp) protein (512aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV00_9RHIZ
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EHK55398.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Undecaprenyl-phosphate glucose phosphotransferase
SCN18_30_10_14_R2_B_scaffold_4382_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2805..3437)
DNA (633bp) protein (211aa)
Invasion associated locus B family protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPC4_9RHIZ
Invasion associated locus B family protein {ECO:0000313|EMBL:ESW91312.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Invasion associated locus B family protein
SCN18_30_10_14_R2_B_scaffold_4382_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4258..6060
DNA (1803bp) protein (601aa)
Probable peptide ABC transporter, substrate-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZX9_9RHIZ
Probable peptide ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EAU40462.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
peptide ABC transporter, periplasmic peptide-binding protein
SCN18_30_10_14_R2_B_scaffold_4382_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6073..6756
DNA (684bp) protein (228aa)
DSBA oxidoreductase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G360_9RHIZ
DSBA oxidoreductase {ECO:0000313|EMBL:ESY20526.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
thiol oxidoreductase
SCN18_30_10_14_R2_B_scaffold_4382_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6775..7704)
DNA (930bp) protein (310aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
UPI0003CE761A related cluster n=1 Tax=unknown RepID=UPI0003CE761A
DEAD/DEAH box helicase
SCN18_30_10_14_R2_B_scaffold_4382_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7646..10177)
DNA (2532bp) protein (844aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UPI0003D05AA8 related cluster n=1 Tax=unknown RepID=UPI0003D05AA8
transcription repair coupling factor
SCN18_30_10_14_R2_B_scaffold_4382_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10202..10489)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003801062
Uncharacterized protein {ECO:0000313|EMBL:ESW76889.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4382_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10584..12413
DNA (1830bp) protein (610aa)
UPI0003D024DA related cluster n=1 Tax=unknown RepID=UPI0003D024DA
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EHK55221.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ATP-dependent DNA helicase RecG
Displaying 10 items

View Taxonomy