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SCN18_30_10_14_R2_B_scaffold_6070

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_6070_1
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1193
DNA (1191bp) protein (397aa)
Oxidoreductase, FAD/NAD(P)-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JDT6_OLICO
N-acetylglucosamine transferase {ECO:0000313|EMBL:EXL02676.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
oxidoreductase, FAD/NAD(P)-binding protein
SCN18_30_10_14_R2_B_scaffold_6070_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1174..2166
DNA (993bp) protein (331aa)
Thiamine biosynthesis lipoprotein ApbE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5T2_9RHIZ
Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:EZQ13279.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
apbE; thiamine biosynthesis lipoprotein ApbE
SCN18_30_10_14_R2_B_scaffold_6070_3
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2310..2783
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B776_PARDP
Uncharacterized protein {ECO:0000313|EMBL:EXL07867.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_6070_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2825..3739)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B777_PARDP
LysR family transcriptional regulator {ECO:0000313|EMBL:EZQ13277.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
LysR family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_6070_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3835..4059
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RI23_9RHOB
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EXL02680.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
heavy metal transport/detoxification protein
SCN18_30_10_14_R2_B_scaffold_6070_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4139..4444
DNA (306bp) protein (102aa)
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RUX0_9RHOB
HAD family hydrolase {ECO:0000313|EMBL:EZQ13275.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Heavy metal translocating P-type ATPase
SCN18_30_10_14_R2_B_scaffold_6070_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4473..4814
DNA (342bp) protein (114aa)
ctpC; putative cation-transporting P-type ATPase CtpC (EC:3.6.3.-)
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RUX0_9RHOB
HAD family hydrolase {ECO:0000313|EMBL:EZQ13275.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCN18_30_10_14_R2_B_scaffold_6070_8
unknown

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4867..5163
DNA (297bp) protein (99aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_6070_9
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5259..5735)
DNA (477bp) protein (159aa)
Cytochrome c oxidase polypeptide II (EC:1.9.3.1)
Cytochrome c class I n=1 Tax=Rhodanobacter denitrificans RepID=I4WYM8_9GAMM
Cytochrome C {ECO:0000313|EMBL:EXL07936.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
SCN18_30_10_14_R2_B_scaffold_6070_10
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5806..6129)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYM9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EZQ15020.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
Displaying 10 items

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