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SCN18_30_10_14_R2_B_scaffold_9946

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_9946_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..574
DNA (573bp) protein (191aa)
Luciferase family protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KKU6_9RHIZ
Alkane 1-monooxygenase {ECO:0000313|EMBL:KKB78671.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
monooxygenase
SCN18_30_10_14_R2_B_scaffold_9946_2
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(511..1185)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000367D538
PTS fructose transporter subunit IIA {ECO:0000313|EMBL:ESX83344.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
PTS lactose transporter subunit IIB
SCN18_30_10_14_R2_B_scaffold_9946_3
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1582..1983)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000363D4DF
Putative K(+)/H(+) antiporter subunit G {ECO:0000313|EMBL:EYR77488.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phaG; putative monovalent cation/H+ antiporter subunit G
SCN18_30_10_14_R2_B_scaffold_9946_4
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1980..2261)
DNA (282bp) protein (94aa)
cation:proton antiporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003795813
Cation:proton antiporter {ECO:0000313|EMBL:ETR77579.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
monovalent cation/H+ antiporter subunit F
SCN18_30_10_14_R2_B_scaffold_9946_5
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2258..2737)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A8449
Monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:EXL10516.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
monovalent cation/H+ antiporter subunit E
SCN18_30_10_14_R2_B_scaffold_9946_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2734..4299)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036DF458
NADH-Ubiquinone/plastoquinone (complex I), various chains family protein
Uncharacterized protein {ECO:0000313|EMBL:ENR19595.1}; TaxID=1160233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis 92/29.;"
SCN18_30_10_14_R2_B_scaffold_9946_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4299..4643)
DNA (345bp) protein (115aa)
cation:proton antiporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003778D33
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:EZQ17695.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
phaC; monovalent cation/H+ antiporter subunit C
SCN18_30_10_14_R2_B_scaffold_9946_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4640..5845)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367EDB7
Na(+) H(+) antiporter subunit A Na(+) H(+) antipo rter subunit B {ECO:0000313|EMBL:CDP49980.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
cation:proton antiporter
Displaying 8 items

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