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2019_SCN_bioreactor_t1_biofilm_scaffold_75520

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_1
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

3..2303
DNA (2301bp) protein (767aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY03_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75202.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_2
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2498..3625
DNA (1128bp) protein (376aa)
Xylose operon regulatory protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A1D2_9PLAN
Xylose operon regulatory protein {ECO:0000313|EMBL:EAQ77381.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
AraC family transcriptional regulator
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_3
Vibrio sp. BZM-1, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3659..5866)
DNA (2208bp) protein (736aa)
Sodium alginate lyase {ECO:0000313|EMBL:AJA30344.1}; EC=4.2.2.3 {ECO:0000313|EMBL:AJA30344.1};; TaxID=1548398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. BZM-1.;"
polu(beta-D-mannuronate) lyase (EC:4.2.2.3)
cyclic nucleotide-binding domain-containing protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B65B
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

6215..6445
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMK9_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB74354.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(6488..7654)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ97_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77169.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_6
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

7844..8629
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IRE2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF94335.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

8796..10700
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNL6_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB74450.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_8
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10764..11588)
DNA (825bp) protein (275aa)
DNA-binding protein with HTH domain n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B3M4_9BACT
LuxR family transcriptional regulator
DNA-binding protein with HTH domain {ECO:0000313|EMBL:EIQ01866.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_9
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12119..19744
DNA (7626bp) protein (2542aa)
Calx-beta domain-containing protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G6T2_ECHVK
Calx-beta domain-containing protein {ECO:0000313|EMBL:AGA80716.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
Calx-beta domain-containing protein
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_10
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19823..20980
DNA (1158bp) protein (386aa)
Secretion protein HlyD family protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMI0_9FIRM
Secretion protein HlyD family protein {ECO:0000313|EMBL:EAX49020.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
secretion protein HlyD family protein
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_11
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21004..22629
DNA (1626bp) protein (542aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMH9_9FIRM
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EAX49019.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
EmrB/QacA subfamily drug resistance transporter
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_12
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22759..24003
DNA (1245bp) protein (415aa)
Calpain-1 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GTS6_9BRAD
Membrane protein {ECO:0000313|EMBL:KEA58255.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
major Facilitator Superfamily protein
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_13
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24232..24795
DNA (564bp) protein (188aa)
hypothetical protein id=17204 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ65012.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_14
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

24934..25155
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXU2_OPITP
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_15
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25277..25702)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1ABI4_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:ERE00393.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
hypothetical protein
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_16
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(26129..26683)
DNA (555bp) protein (185aa)
Response regulator receiver protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZN90_OPITP
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACB73459.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_17
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

27066..28052
DNA (987bp) protein (329aa)
Sterol desaturase n=1 Tax=Rhizobium sp. CF122 RepID=J3BRP2_9RHIZ
fatty acid hydroxylase
Tax=RBG_16_Spirochaete_67_19_curated
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28172..29371)
DNA (1200bp) protein (400aa)
Secretion protein HlyD family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBR0_9BACT
Secretion protein HlyD family protein {ECO:0000313|EMBL:EEF62945.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
emrA; secretion protein HlyD family protein
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(29393..31006)
DNA (1614bp) protein (538aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBR1_9BACT
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EEF62946.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
emrB; drug resistance transporter, EmrB/QacA subfamily
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_20
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(31003..31632)
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPQ3_OPITP
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACB75506.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_21
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(31735..32538)
DNA (804bp) protein (268aa)
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol-phosphate phosphatase {ECO:0000313|EMBL:ACB73623.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ACB73623.1};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Inositol-phosphate phosphatase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQE3_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_22
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(32644..33936)
DNA (1293bp) protein (431aa)
MATE efflux family protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IW05_9BACT
multidrug transporter MATE
Multidrug transporter MATE {ECO:0000313|EMBL:AHF91833.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_23
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(34172..34696)
DNA (525bp) protein (175aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVX6_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_24
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(34788..35237)
DNA (450bp) protein (150aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Phosphodiesterase, MJ0936 family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSR7_OPITP
phosphodiesterase
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_25
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(35241..36521)
DNA (1281bp) protein (427aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVX5_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_26
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(36505..37188)
DNA (684bp) protein (228aa)
SNARE associated Golgi protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVX4_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC83743.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(37507..37926)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJP6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59922.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
membrane protein
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_28
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

38078..38767
DNA (690bp) protein (230aa)
Glycosyl transferase family 2 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVW3_OPITP
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACB75049.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_29
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

39404..40378
DNA (975bp) protein (325aa)
Glycosyl transferase family 2 n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EP58_CORAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC83307.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_75520_30
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

40432..42426
DNA (1995bp) protein (665aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC83301.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
4-amino-4-deoxy-L-arabinose transferase id=4427444 bin=GWF2_Lentisphaerae_50_93 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Displaying items 1-30 of 130 in total

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