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2019_SCN_bioreactor_t1_biofilm_scaffold_129917

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_1
unknown

Not on your lists

1..135
DNA (135bp) protein (45aa)

This feature has no annotations

2019_SCN_bioreactor_t1_biofilm_scaffold_129917_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

359..2404
DNA (2046bp) protein (682aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWL1_OPITP
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACB73335.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_3
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2418..3128
DNA (711bp) protein (237aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWL0_OPITP
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACB73334.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

3290..5665
DNA (2376bp) protein (792aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Glycogen debranching enzyme GlgX n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYQ7_OPITP
glycogen debranching protein GlgX
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_5
unknown

Not on your lists

comp(6214..6486)
DNA (273bp) protein (91aa)

This feature has no annotations

2019_SCN_bioreactor_t1_biofilm_scaffold_129917_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

6584..7528
DNA (945bp) protein (315aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYQ8_OPITP
malto-oligosyltrehalose trehalohydrolase
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7541..8338)
DNA (798bp) protein (266aa)
3-ketoacyl-ACP reductase n=1 Tax=Chlorogloeopsis RepID=UPI0002EC78D5
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KIJ75518.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
dehydrogenase
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_8
unknown

Not on your lists

comp(8426..8812)
DNA (387bp) protein (129aa)

This feature has no annotations

2019_SCN_bioreactor_t1_biofilm_scaffold_129917_9
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(8880..9929)
DNA (1050bp) protein (350aa)
Putative naringenin-chalcone synthase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AQ46_9BACT
Putative naringenin-chalcone synthase {ECO:0000313|EMBL:EIP97137.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
stilbene synthase
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_10
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9938..10960)
DNA (1023bp) protein (341aa)
Putative electron transfer oxidoreductase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWF9_OPITP
electron transfer oxidoreductase
Putative electron transfer oxidoreductase {ECO:0000313|EMBL:ACB76911.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_11
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10957..11592)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IPK5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF94528.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_12
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11614..13161)
DNA (1548bp) protein (516aa)
Glycosyl transferase family 2 n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7VBJ1_DESML
Glycosyl transferase family 2 {ECO:0000313|EMBL:EPR41823.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
family 2 glycosyl transferase
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_13
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

13304..15346
DNA (2043bp) protein (681aa)
Carbon starvation protein CstA n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS08_OPITP
Carbon starvation protein CstA {ECO:0000313|EMBL:ACB74684.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
carbon starvation protein CstA
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_14
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

16434..17423
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYM3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_15
unknown

Not on your lists

17896..18435
DNA (540bp) protein (180aa)

This feature has no annotations

2019_SCN_bioreactor_t1_biofilm_scaffold_129917_16
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(18410..19267)
DNA (858bp) protein (286aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZV3_9BACT
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:CCW36632.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_17
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

19553..20239
DNA (687bp) protein (229aa)
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin n=1 Tax=Chthonomonas calidirosea T49 RepID=S0F075_9BACT
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin {ECO:0000313|EMBL:CCW36633.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_18
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

20305..21216
DNA (912bp) protein (304aa)
Aldo/keto reductase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZZ8_ISOPI
aldo/keto reductase
Tax=CG_Arma_01
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_19
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(21439..22668)
DNA (1230bp) protein (410aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Phosphofructokinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS10_OPITP
6-phosphofructokinase
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_20
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22936..25419)
DNA (2484bp) protein (828aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017465A5
UPF0753 protein WP12_11365 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_21
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25426..26979)
DNA (1554bp) protein (518aa)
putative NADH dehydrogenase (NADH quinone oxidoreductase)(nuoL3-like) protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017465A4
NADH dehydrogenase {ECO:0000313|EMBL:KJV05384.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
NADH dehydrogenase
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_22
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

27066..27941
DNA (876bp) protein (292aa)
LysR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017465A3
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AKC82507.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_23
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(28085..29512)
DNA (1428bp) protein (476aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Adenylosuccinate lyase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS11_OPITP
adenylosuccinate lyase
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_24
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(29516..29842)
DNA (327bp) protein (109aa)
UPF0345 protein Oter_1403 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS12_OPITP
hypothetical protein
UPF0345 protein Oter_1403 {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_25
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(29978..31090)
DNA (1113bp) protein (371aa)
DNA polymerase III, delta subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS13_OPITP
DNA polymerase III subunit delta
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ACB74689.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_26
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(31087..32163)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVK1_OPITP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_27
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32341..33606)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF3_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27799.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_28
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(33613..34266)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNJ8_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB74432.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_29
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(34376..35821)
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IQV2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF90405.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_129917_30
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(36076..37098)
DNA (1023bp) protein (341aa)
type II L-asparaginase (EC:3.5.1.1)
L-asparaginase, type II {ECO:0000313|EMBL:ACB74433.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ACB74433.1};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
L-asparaginase, type II n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNJ9_OPITP
Displaying items 1-30 of 32 in total

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