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2019_SCN_bioreactor_t2_biofilm_scaffold_33665

Search features with annotation key words

Displaying items 1-30 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_1
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

637..1638
DNA (1002bp) protein (334aa)
Outer membrane protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XX65_9PROT
Outer membrane protein {ECO:0000313|EMBL:EGY02139.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
OmpA/MotB family outer membrane protein
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_2
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1648..2994
DNA (1347bp) protein (449aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XX64_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY02138.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2997..4154
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XX63_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY02137.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_4
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4196..4762
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XX62_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY02136.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hypothetical protein
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4775..5722)
DNA (948bp) protein (316aa)
Transposase and inactivated derivatives-like protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QG07_RHOPT
Transposase and inactivated derivatives-like protein
Transposase and inactivated derivatives-like protein {ECO:0000313|EMBL:ACE99598.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_6
unknown

Not on your lists

comp(6815..7474)
DNA (660bp) protein (220aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_33665_7
unknown

Not on your lists

comp(8212..11382)
DNA (3171bp) protein (1057aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_33665_8
unknown

Not on your lists

11723..13186
DNA (1464bp) protein (488aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_33665_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13183..14136
DNA (954bp) protein (318aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase (Fragment) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YXM3_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_10
unknown

Not on your lists

14477..15037
DNA (561bp) protein (187aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_33665_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16625..17620)
DNA (996bp) protein (332aa)
Oligopeptide transport protein (ABC superfamily, ATP-binding protein) {ECO:0000313|EMBL:KFC64987.1}; EC=3.6.3.27 {ECO:0000313|EMBL:KFC64987.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYK5_PARDP
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17617..18597)
DNA (981bp) protein (327aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F03F
ABC transporter ATP-binding protein oligo/dipeptide transport protein {ECO:0000313|EMBL:KFC64988.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
appD; Oligopeptide ABC transporter, ATP-binding protein AppD
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_13
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18594..19508)
DNA (915bp) protein (305aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYK7_PARDP
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABL68351.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_14
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19505..20443)
DNA (939bp) protein (313aa)
glutathione ABC transporter permease n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F041
Glutathione ABC transporter permease {ECO:0000313|EMBL:KGM33409.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
dppB; Dipeptide transporter permease DppB
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20459..22048)
DNA (1590bp) protein (530aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYK9_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGM33410.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Extracellular solute-binding protein family 5
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_16
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22160..23134)
DNA (975bp) protein (325aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYL4_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGD96436.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Mandelate racemase/muconate lactonizing protein
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23689..24711
DNA (1023bp) protein (341aa)
Sugar-binding domain protein (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSH5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGM33415.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Transcriptional regulator, LacI family
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_18
bacterium YEK0313, Bacteria

Not on your lists

comp(25052..26467)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003657E97
Acylamidase {ECO:0000313|EMBL:CEJ10622.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
amidase
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26628..27263
DNA (636bp) protein (212aa)
Putative uncharacterized protein id=3051785 bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_20
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27367..27918)
DNA (552bp) protein (184aa)
UPI0003CF7D69 related cluster n=1 Tax=unknown RepID=UPI0003CF7D69
Chloramphenicol phosphotransferase {ECO:0000313|EMBL:ESY55652.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
hypothetical protein
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_21
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27919..28761)
DNA (843bp) protein (281aa)
UPI0003CE992B related cluster n=1 Tax=unknown RepID=UPI0003CE992B
Oxygen-insensitive NADPH nitroreductase {ECO:0000313|EMBL:ETY83230.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
nitroreductase
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_22
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28829..29356)
DNA (528bp) protein (176aa)
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Inorganic pyrophosphatase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVQ5_GRABC
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29512..31803)
DNA (2292bp) protein (764aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hppA; Pyrophosphate-energized proton pump (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMQ6_AZOBR
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_24
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32022..33701
DNA (1680bp) protein (560aa)
ABC transporter ATP-binding protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVQ4_GRABC
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ABI61098.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_25
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33718..34224
DNA (507bp) protein (169aa)
Acetyltransferase, GNAT family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVQ3_GRABC
acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ABI61099.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34333..35217)
DNA (885bp) protein (295aa)
Alpha/beta hydrolase fold n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LXR2_METRJ
Alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_27
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35227..35829)
DNA (603bp) protein (201aa)
Toluene transport system Ttg2D protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVQ0_GRABC
ABC transporter toluene transporter auxiliary component {ECO:0000313|EMBL:GAN76623.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Toluene transport system Ttg2D protein
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_28
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35870..36778)
DNA (909bp) protein (303aa)
VacJ-like protein (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIP9_9PROT
Lipoprotein {ECO:0000313|EMBL:GAN76624.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Lipoprotein
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_29
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36954..37943
DNA (990bp) protein (330aa)
Methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Methylenetetrahydrofolate reductase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVP8_GRABC
2019_SCN_bioreactor_t2_biofilm_scaffold_33665_30
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37924..38943)
DNA (1020bp) protein (340aa)
Sodium bile acid symporter family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIQ1_9PROT
Sodium bile acid symporter family protein {ECO:0000313|EMBL:EFH12812.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
Displaying items 1-30 of 175 in total

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