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2019_SCN_bioreactor_t2_biofilm_scaffold_199771

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_1
unknown

Not on your lists

comp(218..2887)
DNA (2670bp) protein (890aa)
hypothetical protein
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_2
unknown

Not on your lists

comp(2884..3426)
DNA (543bp) protein (181aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_199771_3

Not on your lists

comp(3455..4765)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI00037D720B
Marine sediment metagenome DNA, contig: S01H4_S08110 {ECO:0000313|EMBL:GAH04847.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CHAT domain
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_4
unknown

Not on your lists

5447..5938
DNA (492bp) protein (164aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_199771_5
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6606..7376)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000367B86F
gluconate 5-dehydrogenase
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:AIR49261.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_6
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7875..8864
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035E2139
dyp-type peroxidase family protein
Dyp-type peroxidase family {ECO:0000313|EMBL:AEU36670.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_7
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8861..9679
DNA (819bp) protein (273aa)
bacteriocin n=1 Tax=Methyloferula stellata RepID=UPI000370147D
Linocin_M18 bacteriocin protein
Linocin_M18 bacteriocin protein {ECO:0000313|EMBL:AEU36671.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_8
unknown

Not on your lists

10262..10375
DNA (114bp) protein (38aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_199771_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10892..12295)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TND5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP65322.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
M20 family peptidase
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12292..13047)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HXE0_AZOC5
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:BAF87488.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_11
bacterium YEK0313, Bacteria

Not on your lists

comp(13044..14072)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037A7183
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:CEJ12454.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
2-dehydropantoate 2-reductase
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14072..14764)
DNA (693bp) protein (231aa)
creatininase n=1 Tax=Deinococcus apachensis RepID=UPI00036A85D7
Creatininase {ECO:0000313|EMBL:KGE01286.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
amidase
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_13
unknown

Not on your lists

comp(14878..15189)
DNA (312bp) protein (104aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_199771_14
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15277..15900
DNA (624bp) protein (208aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:KDM66178.1}; EC=3.2.2.21 {ECO:0000313|EMBL:KDM66178.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
DNA-3-methyladenine glycosylase II n=2 Tax=Acidiphilium RepID=F0J4W1_ACIMA
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_15
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16037..17347
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035C2B12
Uncharacterized protein {ECO:0000313|EMBL:GAN76613.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_16
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17352..18134)
DNA (783bp) protein (261aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRG3_9PROT
Hydrolase/esterase/lipase {ECO:0000313|EMBL:GAN78172.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative hydrolase
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_17
bacterium YEK0313, Bacteria

Not on your lists

comp(18131..19045)
DNA (915bp) protein (305aa)
Putative membrane protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRG4_9PROT
Putative inner membrane transporter yiJE {ECO:0000313|EMBL:CEJ11111.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_18
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19062..20063)
DNA (1002bp) protein (334aa)
NAD(P)H quinone oxidoreductase, PIG3 family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRG5_9PROT
Alcohol dehydrogenase {ECO:0000313|EMBL:GAN76539.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
NAD(P)H quinone oxidoreductase, PIG3 family protein
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_19
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20092..22185)
DNA (2094bp) protein (698aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036E3381
Uncharacterized protein {ECO:0000313|EMBL:ETX07238.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
5-oxoprolinase
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22259..24085)
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037399BB
5-oxoprolinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_21
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24145..24750
DNA (606bp) protein (202aa)
Glutathione S-transferase domain n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ILT8_XANP2
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain {ECO:0000313|EMBL:ABS68981.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24747..25373)
DNA (627bp) protein (209aa)
Glutathione S-transferase III n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F3V3_9RHIZ
Glutathione S-transferase {ECO:0000313|EMBL:KGM32226.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
glutathione S-transferase domain-containing protein
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_23
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25370..26935)
DNA (1566bp) protein (522aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YBV9_9BRAD
Amidase {ECO:0000313|EMBL:KGT79221.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
amidase
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_24
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26928..28220)
DNA (1293bp) protein (431aa)
Diaminopropionate ammonia-lyase family {ECO:0000313|EMBL:EFH10099.1}; EC=4.3.1.15 {ECO:0000313|EMBL:EFH10099.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Diaminopropionate ammonia-lyase family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRH1_9PROT
diaminopropionate ammonia-lyase
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_25
bacterium YEK0313, Bacteria

Not on your lists

comp(28277..29686)
DNA (1410bp) protein (470aa)
Major facilitator superfamily transporter n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QD11_9PSED
Putative multidrug-efflux transporter/MT1670 {ECO:0000313|EMBL:CEJ14808.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative multidrug-efflux transporter
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_26
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29847..31469)
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=3 Tax=Acidiphilium RepID=CH60_ACICJ
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
groL; 60 kDa chaperonin
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_27
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31521..31862)
DNA (342bp) protein (114aa)
10 kDa chaperonin n=3 Tax=Acidiphilium RepID=CH10_ACICJ
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_28
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32001..33017)
DNA (1017bp) protein (339aa)
Oligopeptide transport ATP-binding protein AppF n=1 Tax=Oceanibaculum indicum P24 RepID=K2IRP1_9PROT
Oligopeptide transport ATP-binding protein AppF {ECO:0000313|EMBL:EKE72926.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
oligopeptide/dipeptide ABC transporter ATPase
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_29
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33014..34015)
DNA (1002bp) protein (334aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JE50_9PROT
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKE72927.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
oligopeptide ABC transporter ATP-binding protein
2019_SCN_bioreactor_t2_biofilm_scaffold_199771_30
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34026..34898)
DNA (873bp) protein (291aa)
ABC transporter permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2JCW8_9PROT
ABC transporter permease {ECO:0000313|EMBL:EKE72928.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Dipeptide transport system permease protein DppC
Displaying items 1-30 of 75 in total

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