name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_1
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..104
|
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0E1C2_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFB75856.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_2
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(254..2140)
|
adenylyltransferase (EC:2.7.1.25 2.7.7.4)
Sulfate adenylyltransferase, large subunit id=2841973 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_3
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2140..3120)
|
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
sulfate adenylyltransferase, small subunit (EC:2.7.7.4)
sulfate adenylyltransferase subunit 2 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B77808
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3086..4726)
|
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:CCP15900.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CCP15900.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
glutamate synthase (EC:1.4.1.13)
Glutamate synthase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TMV5_STEMA
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_5
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5369..5956)
|
NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96325.1}; EC=2.7.8.5 {ECO:0000313|EMBL:KIQ96325.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003063507
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5966..7831)
|
excinuclease ABC subunit C n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000319BF76
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
excinuclease ABC subunit C
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_7
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7836..8315)
|
etp; protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UE81_XANAP
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_8
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8308..9093)
|
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WT11_PSEUU
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9173..10174)
|
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
tetraacyldisaccharide 4''''-kinase n=1 Tax=Xanthomonas arboricola RepID=UPI0002FCF4D0
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_10
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10186..11937)
|
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Lipid A ABC exporter n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWF9_PSEUP
lipid A ABC exporter
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_11
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11934..12374)
|
Biopolymer transport protein ExbD n=2 Tax=Xanthomonas RepID=V7ZBQ6_9XANT
Biopolymer transporter {ECO:0000313|EMBL:KGO97754.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
biopolymer transporter
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_12
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12381..13016)
|
Biopolymer transport protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWG1_PSEUP
Ferric siderophore transport system, biopolymer transport protein ExbB {ECO:0000313|EMBL:KGQ19288.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
biopolymer transport protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_13
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13035..15488)
|
Competence-related DNA-transformation transporter n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7FUE2_XANCT
Competence-related DNA-transformation transporter {ECO:0000313|EMBL:ELP97125.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
transporter
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15623..16360)
|
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
ABC transporter ATP-binding subunit n=3 Tax=Stenotrophomonas maltophilia RepID=B2FL91_STRMK
ABC transporter ATP-binding protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_15
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16353..17597)
|
ABC transporter-type lipoprotein-releasing protein n=4 Tax=Xanthomonas campestris RepID=B0RSH1_XANCB
ABC transporter-type lipoprotein-releasing protein
Lipoprotein releasing system transmembrane protein {ECO:0000313|EMBL:AEL07272.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17622..17987)
|
Hypothetical membrane protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U8K8_XANAP
Uncharacterized protein {ECO:0000313|EMBL:AHY59439.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_17
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18019..18279)
|
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WT01_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:KGM52038.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_18
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18315..19634)
|
arabinose ABC transporter permease n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00037C3973
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADV27156.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_19
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19793..20845
|
Ubiquinol oxidase, subunit II n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSZ9_PSEUU
ubiquinol oxidase subunit II
Ubiquinol oxidase, subunit II {ECO:0000313|EMBL:ADV27155.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_20
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20870..22891
|
cytochrome O ubiquinol oxidase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00037DCECB
Cytochrome o ubiquinol oxidase, subunit I {ECO:0000313|EMBL:ADV27154.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
cytochrome o ubiquinol oxidase subunit I
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_21
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22884..23525
|
cytochrome O ubiquinol oxidase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000319DFBB
cytochrome o ubiquinol oxidase subunit III
Cytochrome o ubiquinol oxidase, subunit III {ECO:0000313|EMBL:ADV27153.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_22
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23522..23941
|
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000369B0DE
Cytochrome C oxidase subunit III {ECO:0000313|EMBL:AKC85525.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
cytochrome o ubiquinol oxidase subunit IV
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_23
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23955..24701
|
Putative surfeit locus 1 protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XFD1_VARPD
Uncharacterized protein {ECO:0000313|EMBL:KJK24718.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
putative surfeit locus 1 protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_24
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24664..26010
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Histidine kinase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWQ8_VARPS
histidine kinase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_25
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
26007..26549
|
Two component transcriptional regulator, Fis family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSZ3_PSEUU
Chemotaxis protein CheY {ECO:0000313|EMBL:KIJ71060.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
Fis family transcriptional regulator
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26627..27409)
|
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0002E16119
succinate dehydrogenase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_27
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27428..29215)
|
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
succinate dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B56BDD
succinate dehydrogenase, flavoprotein subunit
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_28
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29222..29617)
|
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UN61_PSEUP
Succinate dehydrogenase {ECO:0000313|EMBL:KGM55886.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
succinate dehydrogenase membrane anchor subunit
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_29
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29614..30030)
|
succinate dehydrogenase subunit C (EC:1.3.5.1)
succinate dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI0003449C5F
Succinate dehydrogenase {ECO:0000313|EMBL:KGM55885.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_137276_30
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30260..31162
|
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003814C7E
Uncharacterized protein {ECO:0000313|EMBL:KGM52032.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
|