name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..148
|
Elongation factor Tu-A n=3 Tax=Xanthomonas campestris pv. campestris RepID=EFTU1_XANCP
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
translation elongation factor 1A (EF-1A/EF-Tu)
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_2
unknown
|
Not on your lists |
148..261
|
This feature has no annotations |
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_3
unknown
|
Not on your lists |
353..634
|
This feature has no annotations |
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
604..915
|
30S ribosomal protein S10 n=4 Tax=Xanthomonas campestris RepID=RS10_XANC8
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
927..1583
|
50S ribosomal protein L3 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7US01_PSEUP
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
rplC; 50S ribosomal protein L3
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
1586..2188
|
50S ribosomal protein L4 n=2 Tax=Stenotrophomonas maltophilia RepID=G0JZ44_STEMA
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328, ECO:0000313|EMBL:KIJ72361.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
50S ribosomal protein L4
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2185..2481
|
50S ribosomal protein L23 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F98405
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
50S ribosomal protein L25/L23
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2493..3320
|
50S ribosomal protein L2 n=2 Tax=Xanthomonas RepID=UPI000262A839
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
50S ribosomal protein L2
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3327..3593
|
30S ribosomal protein S19 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000318BC41
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
30S ribosomal protein S19
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_10
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
3604..3939
|
50S ribosomal protein L22 n=2 Tax=Pseudoxanthomonas RepID=E6WVG5_PSEUU
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
50S ribosomal protein L22
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_11
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3942..4700
|
30S ribosomal protein S3 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D76394
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
30S ribosomal protein S3
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_12
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4704..5117
|
50S ribosomal protein L16 n=9 Tax=Stenotrophomonas RepID=RL16_STRMK
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
rplP; 50S ribosomal protein L16
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5117..5308
|
50S ribosomal protein L29 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030BEE8E
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
50S ribosomal protein L29
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_14
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5321..5584
|
30S ribosomal protein S17 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVG1_PSEUU
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
30S ribosomal protein S17
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_15
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5600..5968
|
50S ribosomal protein L14 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVG0_PSEUU
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
50S ribosomal protein L14
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5986..6300
|
50S ribosomal protein L24 n=2 Tax=Rhodanobacter RepID=I4VM82_9GAMM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
50S ribosomal protein L24
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_17
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6302..6844
|
50S ribosomal protein L5 n=1 Tax=Xanthomonas axonopodis RepID=UPI000313E941
LSU ribosomal protein L5P
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=487899 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. viticola.;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_18
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6854..7159
|
30S ribosomal protein S14 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URY8_PSEUP
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
rpsN; 30S ribosomal protein S14
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_19
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7352..7747
|
30S ribosomal protein S8 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URY7_PSEUP
rpsH; 30S ribosomal protein S8
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_20
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7761..8288
|
50S ribosomal protein L6 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DA52FE
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
50S ribosomal protein L6
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_21
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8372..8725
|
50S ribosomal protein L18 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F33629
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
LSU ribosomal protein L18P
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_22
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8878..9417
|
30S ribosomal protein S5 n=24 Tax=Xanthomonas RepID=RS5_XANAC
rpsE; probable 30S ribosomal protein S5
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_23
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9410..9598
|
50S ribosomal protein L30 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EC3ED0
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
50S ribosomal protein L30
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_24
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9603..10040
|
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
50S ribosomal protein L15 id=2431999 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
rplO; 50S ribosomal protein L15
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_25
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10048..11397
|
preprotein translocase subunit SecY n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000306E4B9
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
preprotein translocase subunit SecY
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_26
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11738..12094
|
30S ribosomal protein S13 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URY0_PSEUP
rpsM; 30S ribosomal protein S13
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_27
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12107..12502
|
30S ribosomal protein S11 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVE8_PSEUU
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
30S ribosomal protein S11
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_28
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12522..13151
|
30S ribosomal protein S4 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URX8_PSEUP
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
rpsD; 30S ribosomal protein S4
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_29
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
13204..14202
|
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:KIJ72376.1}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:KIJ72376.1};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=12 Tax=Stenotrophomonas RepID=RPOA_STRMK
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_207161_30
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14419..14790
|
50S ribosomal protein L17 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVE5_PSEUU
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
50S ribosomal protein L17
|