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2019_SCN_bioreactor_t3_planktonic_scaffold_11889

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

405..518
DNA (114bp) protein (38aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=G8WAK2_KLEOK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDX13322.1}; TaxID=1444067 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S1_C2.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_2
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(493..1230)
DNA (738bp) protein (246aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WAK3_KLEOK
binding-protein-dependent transport system inner membrane protein
Osmoprotectant transport system permease {ECO:0000313|EMBL:EWF66030.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_3
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1214..2161)
DNA (948bp) protein (316aa)
ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein n=2 Tax=Klebsiella oxytoca RepID=G8WAK4_KLEOK
Osmoprotectant ABC transporter ATP-binding subunit YehX
Osmoprotectant ABC transporter ATP-binding subunit YehX {ECO:0000313|EMBL:AFN33364.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_4
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2154..3311)
DNA (1158bp) protein (386aa)
ABC transporter, quaternary amine uptake transporter (QAT) family, permease protein n=2 Tax=Klebsiella oxytoca RepID=G8WAK5_KLEOK
Osmoprotectant ABC transporter permease protein YehY
Osmoprotectant ABC transporter permease protein YehY {ECO:0000313|EMBL:AFN33365.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_5
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3319..4236)
DNA (918bp) protein (306aa)
Osmoprotectant ABC transporter binding protein YehZ n=1 Tax=Klebsiella oxytoca E718 RepID=I6X5U1_KLEOX
osmoprotectant uptake system substrate-binding protein
Osmoprotectant ABC transporter binding protein YehZ {ECO:0000313|EMBL:AFN33366.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_6
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4403..6700)
DNA (2298bp) protein (766aa)
Beta-D-glucoside glucohydrolase n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WAK7_KLEOK
Periplasmic beta-glucosidase {ECO:0000313|EMBL:EWF66034.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
beta-D-glucoside glucohydrolase
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_7
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6895..8637
DNA (1743bp) protein (581aa)
D-lactate dehydrogenase {ECO:0000256|PIRNR:PIRNR000101}; EC=1.1.1.28 {ECO:0000256|PIRNR:PIRNR000101};; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
D-lactate dehydrogenase (EC:1.1.1.28)
D-lactate dehydrogenase n=2 Tax=Klebsiella oxytoca RepID=G8WAK8_KLEOK
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_8
Klebsiella sp. OBRC7, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8735..9289
DNA (555bp) protein (185aa)
Toxin-antitoxin system, toxin component, GNAT family n=2 Tax=Klebsiella RepID=J5USY7_9ENTR
GCN5 family acetyltransferase
Toxin-antitoxin system, toxin component, GNAT family {ECO:0000313|EMBL:EJU24879.1}; TaxID=936565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. OBRC7.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_9
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..10331)
DNA (948bp) protein (316aa)
D-alanyl-D-alanine endopeptidase n=2 Tax=Klebsiella oxytoca RepID=G8WAL0_KLEOK
murein-DD-endopeptidase
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:EWF66037.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_10
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10508..11095)
DNA (588bp) protein (196aa)
Inner membrane protein YohC n=4 Tax=Klebsiella oxytoca RepID=G8WAL1_KLEOK
hypothetical protein
Inner membrane protein yohC {ECO:0000313|EMBL:EHT12889.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_11
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11251..11820
DNA (570bp) protein (190aa)
DedA family inner membrane protein YohD n=2 Tax=Klebsiella oxytoca RepID=I6WSA5_KLEOX
DedA family inner membrane protein YohD
DedA family inner membrane protein YohD {ECO:0000313|EMBL:AFN33374.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_12
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11926..13365)
DNA (1440bp) protein (480aa)
Multidrug resistance outer membrane protein mdtQ n=1 Tax=Klebsiella oxytoca 10-5242 RepID=H3LAG8_KLEOX
Multidrug resistance outer membrane protein mdtQ {ECO:0000313|EMBL:EWF66040.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
multidrug resistance outer membrane protein MdtQ
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_13
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13485..14219
DNA (735bp) protein (245aa)
Methyltransferase type 11 n=2 Tax=Klebsiella oxytoca RepID=G8WAL4_KLEOK
Uncharacterized protein {ECO:0000313|EMBL:EWF66041.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
type 11 methyltransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_14
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14283..15677)
DNA (1395bp) protein (465aa)
6-phospho-beta-glucosidase n=2 Tax=Klebsiella oxytoca RepID=G8WAL5_KLEOK
6-phospho-beta-glucosidase
6-phospho-beta-glucosidase {ECO:0000313|EMBL:AFN33376.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_15
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15695..17554)
DNA (1860bp) protein (620aa)
PTS system protein n=1 Tax=Klebsiella oxytoca E718 RepID=I6WSC7_KLEOX
PTS beta-glucoside transporter subunit IIABC {ECO:0000313|EMBL:AID91267.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
PTS beta-glucoside transporter subunit IIABC
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_16
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17720..18553)
DNA (834bp) protein (278aa)
Beta-glucoside operon transcriptional antiterminator n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WAL7_KLEOK
transcriptional antiterminator BglG
Beta-glucoside operon transcriptional antiterminator {ECO:0000313|EMBL:EWF66044.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_17
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18706..19338)
DNA (633bp) protein (211aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
tRNA-dihydrouridine synthase n=2 Tax=Klebsiella oxytoca RepID=G8WAL8_KLEOK
tRNA-dihydrouridine synthase C
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_18
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19484..21712
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Baildon str. R6-199 RepID=G9W6T3_SALET
Uncharacterized protein {ECO:0000313|EMBL:EHJ82049.1}; TaxID=913069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Baildon str. R6-199.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_19
RIFOXYB12_FULL_Sulfurimonas_35_9_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

21872..23020
DNA (1149bp) protein (383aa)
Retron-type reverse transcriptase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPP2_9VIBR
retron-type reverse transcriptase
Tax=RIFOXYB12_FULL_Sulfurimonas_35_9_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_20
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23070..24731
DNA (1662bp) protein (554aa)
Recombinase n=3 Tax=root RepID=A9APW9_BURM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM73081.1}; TaxID=1443113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica LC20.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_21
Serratia proteamaculans, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24789..25430
DNA (642bp) protein (214aa)
Resolvase domain n=1 Tax=Serratia proteamaculans (strain 568) RepID=A8GC07_SERP5
resolvase domain-containing protein
Resolvase domain {ECO:0000313|EMBL:ABV40647.1}; TaxID=399741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia proteamaculans (strain 568).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_22
unknown

Not on your lists

comp(25951..26325)
DNA (375bp) protein (125aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_11889_23
unknown

Not on your lists

comp(26322..26627)
DNA (306bp) protein (102aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_11889_24
Edwardsiella piscicida, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27723..28085
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Edwardsiella tarda C07-087 RepID=M4TXC4_EDWTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH72905.1}; TaxID=1288122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella piscicida C07-087.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_25
Shewanella piezotolerans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28103..28654
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CRD5_SHEPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ29943.1}; TaxID=225849 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella piezotolerans (strain WP3 / JCM 13877).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_26
Edwardsiella piscicida, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28641..28877
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Vibrio anguillarum RepID=UPI00031D66C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH72906.1}; TaxID=1288122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella piscicida C07-087.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_27
Shewanella piezotolerans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28864..30555
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CRD6_SHEPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ29944.1}; TaxID=225849 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella piezotolerans (strain WP3 / JCM 13877).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_28
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30808..31116)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Baildon str. R6-199 RepID=G9W6T8_SALET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM73061.1}; TaxID=1443113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica LC20.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_29
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31166..32104)
DNA (939bp) protein (313aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=913069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Baildon str. R6-199.;"
tRNA-dihydrouridine synthase n=1 Tax=Salmonella enterica subsp. enterica serovar Baildon str. R6-199 RepID=G9W6T9_SALET
tRNA-dihydrouridine synthase C
2019_SCN_bioreactor_t3_planktonic_scaffold_11889_30
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32154..33014)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Baildon str. R6-199 RepID=G9W6U0_SALET
Uncharacterized protein {ECO:0000313|EMBL:EHJ82035.1}; TaxID=913069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Baildon str. R6-199.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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