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SCNpilot_BF_INOC_scaffold_2438_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2438_curated_1
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..308
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VDM019 RepID=R8EDC3_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOO34084.1}; TaxID=1053246 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VDM019.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2438_curated_2
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

323..676
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7W210_PAETH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET59190.1}; TaxID=985665 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae (strain HPL-003).;"
SCNpilot_BF_INOC_scaffold_2438_curated_3
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

695..1015
DNA (321bp) protein (107aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
kptA; RNA 2'-phosphotransferase (EC:2.7.1.-)
Probable RNA 2'-phosphotransferase n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LQD9_9FIRM
SCNpilot_BF_INOC_scaffold_2438_curated_4
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1012..1227
DNA (216bp) protein (72aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
kptA; RNA 2'-phosphotransferase (EC:2.7.1.-)
RNA 2''''-phosphotransferase n=1 Tax=Brevibacillus brevis RepID=UPI0003659719
SCNpilot_BF_INOC_scaffold_2438_curated_5
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1485..2372
DNA (888bp) protein (296aa)
Hemagglutinin-related protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6FZZ3_RALS8
hemagglutinin-related protein
Hemagglutinin-related protein {ECO:0000313|EMBL:AEG68576.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
SCNpilot_BF_INOC_scaffold_2438_curated_6
unknown

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2375..2698
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2438_curated_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3109..3501)
DNA (393bp) protein (131aa)
Predicted permeases n=1 Tax=Clostridium sp. CAG:557 RepID=R6HCM5_9CLOT
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDZ24129.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2438_curated_8
unknown

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comp(3863..4390)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2438_curated_9
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4549..4887)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UDY2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ24579.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2438_curated_10
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4887..5126)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:557 RepID=R6GGY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB24708.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2438_curated_11
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5227..5706
DNA (480bp) protein (160aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Phosphodiesterase family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8D0_9CLOT
hypothetical protein
SCNpilot_BF_INOC_scaffold_2438_curated_12
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6005..6916
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2QGA9_9ENTE
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
SCNpilot_BF_INOC_scaffold_2438_curated_13
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7095..8384
DNA (1290bp) protein (430aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZC0_CLOSW rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ADL04371.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
SCNpilot_BF_INOC_scaffold_2438_curated_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8622..9536
DNA (915bp) protein (305aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4B7_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI72994.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
DNA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_2438_curated_15
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9648..11729
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FNE0_PAEMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI38977.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP414).;"
Displaying 15 items

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