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SCNpilot_BF_INOC_scaffold_2264_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2264_curated_1
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1780..2106
DNA (327bp) protein (109aa)
Transcriptional regulator, XRE family n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VVR8_DESAS
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV62383.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
SCNpilot_BF_INOC_scaffold_2264_curated_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2346..2720)
DNA (375bp) protein (125aa)
Transcriptional repressor, CopY family n=1 Tax=Clostridium ultunense Esp RepID=M1ZEC9_9CLOT
Transcriptional repressor, CopY family {ECO:0000313|EMBL:CCQ96333.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
CopY family transcriptional regulator
SCNpilot_BF_INOC_scaffold_2264_curated_3
unknown

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2938..3384
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2264_curated_4
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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3501..4082
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4S9_DESAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA59990.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
SCNpilot_BF_INOC_scaffold_2264_curated_5
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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4144..4596
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRB2_ACEAZ
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
SCNpilot_BF_INOC_scaffold_2264_curated_6
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4602..5000)
DNA (399bp) protein (133aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
Signal transduction histidine kinase, nitrogen specific n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KH04_9FIRM
signal transduction histidine kinase, nitrogen specific
SCNpilot_BF_INOC_scaffold_2264_curated_7
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5026..5355)
DNA (330bp) protein (110aa)
Putative transcriptional regulator n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A4R2_DESDJ
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFL98946.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
SCNpilot_BF_INOC_scaffold_2264_curated_8
unknown

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5622..5747
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2264_curated_9
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5889..6890
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KU96_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK97937.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
SCNpilot_BF_INOC_scaffold_2264_curated_10
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7394..7912
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DMC6_DESRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG60593.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
SCNpilot_BF_INOC_scaffold_2264_curated_11
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

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7979..8371
DNA (393bp) protein (131aa)
Response regulator receiver protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STU2_SYNGF
Histidine kinase {ECO:0000313|EMBL:KJS50454.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
response regulator receiver protein
SCNpilot_BF_INOC_scaffold_2264_curated_12
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8422..9036
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KU96_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK97937.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Displaying 12 items

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