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scnpilot_p_inoc_scaffold_3208

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3208_1
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(216..641)
DNA (426bp) protein (142aa)
DNA-invertase from lambdoid prophage e14 n=1 Tax=Rhizobium sp. RepID=L0NMU4_RHISP
DNA-invertase from lambdoid prophage e14 {ECO:0000313|EMBL:CCF22395.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
recombinase
scnpilot_p_inoc_scaffold_3208_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(786..3794)
DNA (3009bp) protein (1003aa)
Transposase n=1 Tax=Sphingomonas sp. ERG5 RepID=T1YX26_9SPHN rbh
Putative transposase protein {ECO:0000313|EMBL:CDN95691.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; A
Tn5045 transposase
scnpilot_p_inoc_scaffold_3208_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3801..4427)
DNA (627bp) protein (209aa)
Resolvase domain-containing protein n=2 Tax=Sphingomonadaceae RepID=M4SME4_9SPHN rbh
Riorf6 protein {ECO:0000313|EMBL:CDN95692.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium t
resolvase domain-containing protein
scnpilot_p_inoc_scaffold_3208_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4631..5182
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB07
Uncharacterized protein {ECO:0000313|EMBL:ENY81013.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
scnpilot_p_inoc_scaffold_3208_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5203..6378)
DNA (1176bp) protein (392aa)
Putative methyl-accepting chemotaxis receptor/sensory transducer with PAS domain n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SE66_9BRAD
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:EYR79523.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shine
Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_3208_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7035..7295)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036F8334
Uncharacterized protein {ECO:0000313|EMBL:CEL26583.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
scnpilot_p_inoc_scaffold_3208_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7576..8118)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UGY2_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EYR79520.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
scnpilot_p_inoc_scaffold_3208_8
unknown

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8480..8683
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3208_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8886..9785
DNA (900bp) protein (300aa)
Putative integrase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UGY7_RHIRD rbh
Phage integrase family {ECO:0000313|EMBL:EYR79519.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
integrase rbh
scnpilot_p_inoc_scaffold_3208_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9782..10087
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJ72_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79518.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
scnpilot_p_inoc_scaffold_3208_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10084..10287)
DNA (204bp) protein (68aa)
Mobilization protein A {ECO:0000313|EMBL:EYR79517.1}; EC=2.7.7.- {ECO:0000313|EMBL:EYR79517.1};; EC=5.99.1.2 {ECO:0000313|EMBL:EYR79517.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaprote
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EH77_9RHIZ
Displaying 11 items

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