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scnpilot_p_inoc_scaffold_3920

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3920_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1023
DNA (1023bp) protein (341aa)
Cytochrome c, class I id=1334551 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
cytochrome c, class I; K07243 high-affinity iron transporter Tax=GWE1_Thiobacillus_62_9_curated
cytochrome c, class I
scnpilot_p_inoc_scaffold_3920_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1020..1220
DNA (201bp) protein (67aa)
Conserved domain protein id=1334552 bin=GWE1_T_denit_62_9 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Conserved domain protein Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_scaffold_3920_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1293..3326
DNA (2034bp) protein (678aa)
TonB-dependent siderophore receptor id=1334553 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
TonB-dependent siderophore receptor Tax=GWE1_Thiobacillus_62_9_curated
TonB-dependent siderophore receptor
scnpilot_p_inoc_scaffold_3920_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3335..4546
DNA (1212bp) protein (404aa)
Putative uncharacterized protein id=1334554 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3920_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4543..6432
DNA (1890bp) protein (630aa)
Putative uncharacterized protein id=1334555 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3920_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6372..7511
DNA (1140bp) protein (380aa)
Transport protein id=1334556 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
transport protein Tax=GWE1_Thiobacillus_62_9_curated
transport protein
scnpilot_p_inoc_scaffold_3920_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7526..9004
DNA (1479bp) protein (493aa)
Iron transporter id=1334557 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
iron transporter Tax=GWE1_Thiobacillus_62_9_curated
iron transporter
scnpilot_p_inoc_scaffold_3920_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9122..10276
DNA (1155bp) protein (385aa)
diaminopimelate decarboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C41A9 rbh
diaminopimelate decarboxylase
Diaminopimelate decarboxylase {ECO:0000313|EMBL:AAZ96670.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
scnpilot_p_inoc_scaffold_3920_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10283..11044
DNA (762bp) protein (254aa)
putative aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=GWE1_Thiobacillus_62_9_curated
Putative aldolase id=1317134 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
aldolase
scnpilot_p_inoc_scaffold_3920_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11259..12341
DNA (1083bp) protein (361aa)
Putative uncharacterized protein id=1317133 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3920_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12691..13359
DNA (669bp) protein (223aa)
Periplasmic protein TonB id=1317132 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
periplasmic protein TonB; K03832 periplasmic protein TonB Tax=GWE1_Thiobacillus_62_9_curated
periplasmic protein TonB
scnpilot_p_inoc_scaffold_3920_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13363..14109
DNA (747bp) protein (249aa)
MotA/TolQ/ExbB proton channel family protein id=1317131 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB Tax=GWE1_Thiobacillus_62_9_curated
MotA/TolQ/ExbB proton channel family protein
scnpilot_p_inoc_scaffold_3920_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14109..14528
DNA (420bp) protein (140aa)
Putative biopolymer transport protein id=1317130 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=GWE1_Thiobacillus_62_9_curated
biopolymer transport protein
scnpilot_p_inoc_scaffold_3920_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14629..16737
DNA (2109bp) protein (703aa)
TonB-dependent siderophore receptor id=1317129 bin=GWE1_T_denit_62_9 species=Thioalkalimicrobium aerophilum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
TonB-dependent receptor, plug Tax=GWE1_Thiobacillus_62_9_curated
outer membrane iron(III) dicitrate receptor
scnpilot_p_inoc_scaffold_3920_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16775..17323
DNA (549bp) protein (183aa)
Putative uncharacterized protein id=1317128 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3920_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17506..17802)
DNA (297bp) protein (99aa)
Histone-like DNA-binding protein id=1317127 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=GWE1_Thiobacillus_62_9_curated
histone-like DNA-binding protein
Displaying 16 items

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