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scnpilot_p_inoc_scaffold_1483

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1483_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62..553
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KMQ2_RHISN
Toxin {ECO:0000313|EMBL:KKB84644.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1483_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(751..1338)
DNA (588bp) protein (196aa)
ArgG n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ86_XANP2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB84645.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1483_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2115..2417)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFA7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB84646.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1483_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2479..2808)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003630428
Uncharacterized protein {ECO:0000313|EMBL:KKB84647.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1483_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2805..3692)
DNA (888bp) protein (296aa)
UPI0003D0012E related cluster n=1 Tax=unknown RepID=UPI0003D0012E rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB84648.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1483_6
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3689..4165)
DNA (477bp) protein (159aa)
UPI0003D04B40 related cluster n=1 Tax=unknown RepID=UPI0003D04B40
Uncharacterized protein {ECO:0000313|EMBL:KKB84649.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1483_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4254..5960)
DNA (1707bp) protein (569aa)
Mll9312 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q981M4_RHILO rbh
Plasmid partitioning protein {ECO:0000313|EMBL:KKB84650.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17
plasmid partitioning protein
scnpilot_p_inoc_scaffold_1483_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6270..6575
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IN92_RHIML
Uncharacterized protein {ECO:0000313|EMBL:KKB84651.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1483_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6578..7015
DNA (438bp) protein (146aa)
Transcriptional regulator, XRE family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QEY5_NITHX
XRE family transcriptional regulator {ECO:0000313|EMBL:KKB84652.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia lim
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_1483_10
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7070..7444
DNA (375bp) protein (125aa)
UPI0003D01BE9 related cluster n=1 Tax=unknown RepID=UPI0003D01BE9
Uncharacterized protein {ECO:0000313|EMBL:KKB84653.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
Hypothetical protein
scnpilot_p_inoc_scaffold_1483_11
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7298..12397)
DNA (5100bp) protein (1700aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJ21_9RHIZ
Lactate dehydrogenase {ECO:0000313|EMBL:KKB84654.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
N-6 DNA methylase
scnpilot_p_inoc_scaffold_1483_12
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12535..12933)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK29_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KKB84655.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1483_13
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12949..13539)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036A4406
Uncharacterized protein {ECO:0000313|EMBL:KKB84727.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1483_14
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13736..14710)
DNA (975bp) protein (325aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQR5_OLICM
Uncharacterized protein {ECO:0000313|EMBL:KKB84656.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
hypothetical protein
scnpilot_p_inoc_scaffold_1483_15
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15369..15704
DNA (336bp) protein (112aa)
Integrase core domain protein n=4 Tax=Enterobacteriaceae RepID=M3TYN5_KLEPN
Integrase {ECO:0000313|EMBL:KKC31443.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
Hypothetical protein
scnpilot_p_inoc_scaffold_1483_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15906..16379
DNA (474bp) protein (158aa)
UPI0003CEC6F8 related cluster n=1 Tax=unknown RepID=UPI0003CEC6F8
Uncharacterized protein {ECO:0000313|EMBL:KKB84657.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
transcriptional regulator
scnpilot_p_inoc_scaffold_1483_17
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16517..17503
DNA (987bp) protein (329aa)
conjugal transfer protein TraG n=1 Tax=Rhizobium giardinii RepID=UPI00035E41EC
Conjugal transfer protein TraG {ECO:0000313|EMBL:KKB84630.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM
conjugal transfer coupling protein TraG
scnpilot_p_inoc_scaffold_1483_18
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17565..18344)
DNA (780bp) protein (260aa)
ISPsy4, transposition helper protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2S7P6_9PROT
ATP-binding protein {ECO:0000313|EMBL:KKC32538.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
IstB ATP binding domain-containing protein
scnpilot_p_inoc_scaffold_1483_19
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18334..19860)
DNA (1527bp) protein (509aa)
Putative integrase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICA8_9SPHN rbh
putative integrase
Putative integrase {ECO:0000313|EMBL:CCA89933.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
scnpilot_p_inoc_scaffold_1483_20
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19974..20066
DNA (93bp) protein (31aa)
Ti-type conjugative transfer system protein TraG n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3V3_AGRVS
traG-1; conjugal transfer coupling protein TraG 1
Conjugal transfer protein TraG {ECO:0000313|EMBL:GAK72255.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacter
Displaying 20 items

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