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scnpilot_p_inoc_scaffold_1910

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1910_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146..1093)
DNA (948bp) protein (316aa)
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein id=5079899 bin=GWF1_Burkholderiales_GWF1_66_17 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ABC-type metal ion transport system, periplasmic component/surface adhesin
scnpilot_p_inoc_scaffold_1910_2
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1100..1972)
DNA (873bp) protein (291aa)
mntB1; putative manganese transport system permease; K02075 zinc/manganese transport system permease protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
ABC superfamily ATP binding cassette transporter, membrane protein id=1262460 bin=GWE1_Burkholderiales_65_30 species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ABC-type Mn2+/Zn2+ transport system, permease components
scnpilot_p_inoc_scaffold_1910_3
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1969..2742)
DNA (774bp) protein (258aa)
mntA1; putative manganese transport system ATP-asa protein (EC:3.6.3.35); K02074 zinc/manganese transport system ATP-binding protein id=5079901 bin=GWF1_Burkholderiales_GWF1_66_17 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
mntA1; ABC-type Mn/Zn transport system, ATPase component
ABC-type Mn/Zn transport system, ATPase component {ECO:0000313|EMBL:BAO80627.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamon
scnpilot_p_inoc_scaffold_1910_4
unknown

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comp(2746..2901)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1910_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2904..4169)
DNA (1266bp) protein (422aa)
nickel transporter n=1 Tax=Ochrobactrum anthropi RepID=UPI000289AB36
High-affinity nickel-transporter {ECO:0000313|EMBL:KFC64628.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transporter membrane protein
scnpilot_p_inoc_scaffold_1910_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4198..5241)
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK00_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1910_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5274..6233)
DNA (960bp) protein (320aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK01_9BURK
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EHR70973.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bact
soxH; SoxH like protein
scnpilot_p_inoc_scaffold_1910_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6230..7144)
DNA (915bp) protein (305aa)
superoxide dismutase n=1 Tax=Variovorax paradoxus RepID=UPI000380A309
manganese and iron superoxide dismutase
Manganese and iron superoxide dismutase {ECO:0000313|EMBL:ACS22347.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
scnpilot_p_inoc_scaffold_1910_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7155..8498)
DNA (1344bp) protein (448aa)
Chromate transporter, chromate ion transporter family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJZ8_9BURK
Chromate transporter, chromate ion transporter family {ECO:0000313|EMBL:EHR70970.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bact
chromate transporter
scnpilot_p_inoc_scaffold_1910_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8495..9436)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJZ7_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70969.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1910_11
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9516..9956)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037300FA
Uncharacterized protein {ECO:0000313|EMBL:EKF58113.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1910_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9966..11288)
DNA (1323bp) protein (441aa)
H+ Antiporter protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU65_9BURK
H+ Antiporter protein {ECO:0000313|EMBL:EIK92755.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. P
putative H+ Antiporter protein
scnpilot_p_inoc_scaffold_1910_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11311..11595)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU64_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92754.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_1910_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11709..12050
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU63_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92753.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
scnpilot_p_inoc_scaffold_1910_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12141..12887
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU62_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92752.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
membrane protein
scnpilot_p_inoc_scaffold_1910_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12908..13591
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU61_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92751.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_1910_17
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13744..14307
DNA (564bp) protein (188aa)
Methyltransferase type 12 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JW3_MESSB
ribosomal RNA methyltransferase protein
Ribosomal RNA methyltransferase protein {ECO:0000313|EMBL:AJD39844.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; R
scnpilot_p_inoc_scaffold_1910_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14344..14865
DNA (522bp) protein (174aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
lspAD; prolipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] id=12550145 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
lipoprotein signal peptidase
Displaying 18 items

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