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scnpilot_p_inoc_scaffold_5783

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5783_1
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..260)
DNA (258bp) protein (86aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=CG_Rhodof_01
NUDIX hydrolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YB3_RHOFD
NUDIX hydrolase
scnpilot_p_inoc_scaffold_5783_2
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(260..565)
DNA (306bp) protein (102aa)
Putative transmembrane protein n=2 Tax=Comamonas testosteroni RepID=B7WRT5_COMTE
membrane protein
hypothetical protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
scnpilot_p_inoc_scaffold_5783_3
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(568..777)
DNA (210bp) protein (70aa)
NADH dehydrogenase subunit N (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH-quinone oxidoreductase subunit N n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YB4_RHOFD
scnpilot_p_inoc_scaffold_5783_4
Pseudomonas phage MP1412, Caudovirales, Viruses

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794..1327
DNA (534bp) protein (178aa)
Head morphogenesis/minor structural protein n=1 Tax=Pseudomonas phage MP1412 RepID=I6WCA6_9CAUD rbh
Head morphogenesis/minor structural protein {ECO:0000313|EMBL:AFN39625.1}; TaxID=1204517 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Pseudomonas phage MP1412.;
hypothetical protein
scnpilot_p_inoc_scaffold_5783_5
Pseudomonas phage YuA, Yualikevirus, Caudovirales, Viruses

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1396..2178
DNA (783bp) protein (261aa)
Structural phage protein n=1 Tax=Pseudomonas phage YuA RepID=A9J585_9CAUD rbh
Structural phage protein {ECO:0000313|EMBL:CAO77810.1}; TaxID=462590 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Yualikevirus.;" source="Pseudomonas phage YuA.;"
hypothetical protein
scnpilot_p_inoc_scaffold_5783_6
Pseudomonas phage MP1412, Caudovirales, Viruses

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2374..3306
DNA (933bp) protein (311aa)
Major structural protein n=1 Tax=Pseudomonas phage MP1412 RepID=I6X856_9CAUD rbh
Major structural protein {ECO:0000313|EMBL:AFN39627.1}; TaxID=1204517 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Pseudomonas phage MP1412.;"
hypothetical protein
scnpilot_p_inoc_scaffold_5783_7
Pseudomonas phage YuA, Yualikevirus, Caudovirales, Viruses

Not on your lists

3435..4040
DNA (606bp) protein (202aa)
Putative uncharacterized protein gp58 n=1 Tax=Pseudomonas phage YuA RepID=A9J590_9CAUD rbh
Putative uncharacterized protein gp58 {ECO:0000313|EMBL:CAO77813.1}; TaxID=462590 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Yualikevirus.;" source="Pseudomonas phage Y
scnpilot_p_inoc_scaffold_5783_8
Pseudomonas phage YuA, Yualikevirus, Caudovirales, Viruses

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4068..4238
DNA (171bp) protein (57aa)
Structural phage protein n=2 Tax=Siphoviridae RepID=A9J592_9CAUD
Structural phage protein {ECO:0000313|EMBL:CAO77814.1}; TaxID=462590 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Yualikevirus.;" source="Pseudomonas phage YuA.;"
scnpilot_p_inoc_scaffold_5783_9
unknown

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4474..4740
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_5783_10
Pseudomonas phage YuA, Yualikevirus, Caudovirales, Viruses

Not on your lists

4808..5143
DNA (336bp) protein (112aa)
Holin n=1 Tax=Pseudomonas phage MP1412 RepID=I6X862_9CAUD
Putative uncharacterized protein gp61 {ECO:0000313|EMBL:CAO77816.1}; TaxID=462590 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Yualikevirus.;" source="Pseudomonas phage Y
hypothetical protein
scnpilot_p_inoc_scaffold_5783_11
Pseudomonas phage MP1412, Caudovirales, Viruses

Not on your lists

5128..5853
DNA (726bp) protein (242aa)
hypothetical protein ORF023 n=1 Tax=Pseudomonas phage M6 RepID=UPI00015543F7 rbh
Phage lysin; murein transglycosylase
Endolysin {ECO:0000313|EMBL:AFN39633.1}; TaxID=1204517 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Pseudomonas phage MP1412.;"
scnpilot_p_inoc_scaffold_5783_12
Pseudomonas phage MP1412, Caudovirales, Viruses

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5853..6371
DNA (519bp) protein (173aa)
hypothetical protein ORF024 n=1 Tax=Pseudomonas phage M6 RepID=UPI00015543F8 rbh
Structural protein {ECO:0000313|EMBL:AFN39634.1}; TaxID=1204517 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Pseudomonas phage MP1412.;"
scnpilot_p_inoc_scaffold_5783_13
Pseudomonas phage MP1412, Caudovirales, Viruses

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6375..6743
DNA (369bp) protein (123aa)
hypothetical protein ORF025 n=1 Tax=Pseudomonas phage M6 RepID=UPI00015543F9
phage protein
Structural protein {ECO:0000313|EMBL:AFN39635.1}; TaxID=1204517 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Pseudomonas phage MP1412.;"
scnpilot_p_inoc_scaffold_5783_14
Pseudomonas phage MP1412, Caudovirales, Viruses

Not on your lists

6740..6886
DNA (147bp) protein (49aa)
Structural protein n=1 Tax=Pseudomonas phage MP1412 RepID=I6XHN8_9CAUD
Structural protein {ECO:0000313|EMBL:AFN39636.1}; TaxID=1204517 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Pseudomonas phage MP1412.;"
Displaying 14 items

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