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scnpilot_p_inoc_scaffold_2725

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2725_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1481)
DNA (1479bp) protein (493aa)
Conjugal transfer coupling protein TraG n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WYJ9_PSEDE
conjugal transfer coupling protein TraG
Conjugal transfer protein TraG {ECO:0000313|EMBL:KIL02540.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas st
scnpilot_p_inoc_scaffold_2725_2
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1718..1996)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WUJ8_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI23818.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denit
scnpilot_p_inoc_scaffold_2725_3
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1993..2937)
DNA (945bp) protein (315aa)
LysR-family transcriptional regulator TraR n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WVK8_PSEDE rbh
LysR-family transcriptional regulator TraR rbh
LysR-family transcriptional regulator TraR {ECO:0000313|EMBL:AGI23819.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
scnpilot_p_inoc_scaffold_2725_4
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3150..3758
DNA (609bp) protein (203aa)
TetR family transcriptional regulator n=2 Tax=Pseudomonas RepID=M4XEQ7_PSEDE rbh
TetR family transcriptional regulator rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:AGI23820.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
scnpilot_p_inoc_scaffold_2725_5
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3826..4245
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WX73_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI23821.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denit
scnpilot_p_inoc_scaffold_2725_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4493..5242
DNA (750bp) protein (250aa)
Efflux pump membrane fusion protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WYK3_PSEDE
Secretion protein HlyD {ECO:0000313|EMBL:KIL02545.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (
efflux pump membrane fusion protein
scnpilot_p_inoc_scaffold_2725_7
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5244..7016
DNA (1773bp) protein (591aa)
ABC transporter n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WUK2_PSEDE rbh
ABC transporter {ECO:0000313|EMBL:AGI23823.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans
ABC transporter
scnpilot_p_inoc_scaffold_2725_8
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7013..8182
DNA (1170bp) protein (390aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003475830 rbh
ybhS; putative ABC transporter permease
Putative transporter subunit: permease component of ABC superfamily {ECO:0000313|EMBL:ABF08154.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae
scnpilot_p_inoc_scaffold_2725_9
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8187..9305
DNA (1119bp) protein (373aa)
ABC-2 type transporter n=4 Tax=Proteobacteria RepID=F4G4S1_ALIDK rbh
ABC transporter
ABC transporter {ECO:0000313|EMBL:ENO79269.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
scnpilot_p_inoc_scaffold_2725_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9302..10840
DNA (1539bp) protein (513aa)
RND transporter n=1 Tax=Pseudomonas stutzeri RepID=UPI000313065A rbh
NodT family RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:GAO23860.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph
NodT family RND efflux system outer membrane lipoprotein
scnpilot_p_inoc_scaffold_2725_11
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10861..11070
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WYK8_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXF44996.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. B
scnpilot_p_inoc_scaffold_2725_12
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11078..12487
DNA (1410bp) protein (470aa)
Beta-lactamase domain-containing protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WUK4_PSEDE rbh
Putative metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EXF44995.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
beta-lactamase domain-containing protein
scnpilot_p_inoc_scaffold_2725_13
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12487..13353
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WVL9_PSEDE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI23829.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denit
scnpilot_p_inoc_scaffold_2725_14
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13350..14549
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4XER8_PSEDE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI23830.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denit
scnpilot_p_inoc_scaffold_2725_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14598..15071
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZNC5_THASP rbh
Cytochrome C {ECO:0000313|EMBL:KIL02555.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomona
hypothetical protein
scnpilot_p_inoc_scaffold_2725_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15109..15999)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WGR1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37360.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
virD2; relaxase type IV secretory pathway VirD2
scnpilot_p_inoc_scaffold_2725_17
unknown

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16085..16321
DNA (237bp) protein (79aa)
predicted protein, partial n=1 Tax=Populus trichocarpa RepID=UPI00019400F1
hypothetical protein
Displaying 17 items

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