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scnpilot_p_inoc_scaffold_2184_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3764..4297

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 177.0
  • Bit_score: 326
  • Evalue 2.50e-86
sigma-70 family RNA polymerase sigma factor id=12498535 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 174.0
  • Bit_score: 284
  • Evalue 6.00e-74
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 168.0
  • Bit_score: 263
  • Evalue 4.00e-68

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAATTGCCTGATGCGTGCCTGGGACAGCCACGAGGCGGAGTTGCGCGCCTGGCTGCGCCGCCGTCTGGATAATTCGCACGATGCCGAGGACCTGTTGCAGGACCTGTTCCTCAAAGCCCTGCGCCAGGACAAGAAATTCTGCGAGATCGCTAATGCCCGCGCCTGGCTGTACGAGGTGGCAAGGAACACATTGGCCGATCGGCTGCGCGTGAAGCGGGAGCAGATCGAGTTGCCGGAAAACCTGTTCGTGGAGCACGACGAGCCCGCCGCCGTCGAGTCACTGGCCGTCTGCCTGCCGCGCGTCCTGGCGAAACTGCCCGAGGAAGACCGCGAAGCCATTACCCGTTGCGATCTGGAGGGGATGAGCCAGCAGGACTACGCCCGCCTCAAGGACCTGAGCCTGCCGGGCGCGAAATCGCGCGTGCAGCGTGCCCGCAAGCGCCTGCGCGACGAACTCACGCAAACCTGCGGGGTGCGTTTCGACGAGGCGGGGAATGTCTGCTGCTTCGTTCCCGGCGGACGCGGCTGCTAA
PROTEIN sequence
Length: 178
MNCLMRAWDSHEAELRAWLRRRLDNSHDAEDLLQDLFLKALRQDKKFCEIANARAWLYEVARNTLADRLRVKREQIELPENLFVEHDEPAAVESLAVCLPRVLAKLPEEDREAITRCDLEGMSQQDYARLKDLSLPGAKSRVQRARKRLRDELTQTCGVRFDEAGNVCCFVPGGRGC*