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scnpilot_p_inoc_scaffold_3102_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..718

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Rhizobium radiobacter RepID=UPI0003754F38 similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 232.0
  • Bit_score: 172
  • Evalue 4.50e-40
IclR family transcriptional regulator {ECO:0000313|EMBL:EPR18490.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 232.0
  • Bit_score: 172
  • Evalue 6.20e-40
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 229.0
  • Bit_score: 170
  • Evalue 6.20e-40

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
CCGGACATGGGCGTCGTCTGCGGCTGGTCGGAATCGGGCGATCTTATTTTCGCCGACGGCCGGGGCGTTTTCCGGCACGACGCGACCGGGGAACGCGAGGTCCGGATCGCCGAATTTCCACGCAGCCAAAGCGCGAACCGCCTCAACAACAGCGCTATCGATCCCAATGGCGGCGTCTGGCTGACCAGCATGAACATCCGCGCGCATCCCGGCGAGGGCGAGGTGCTTCGGGTCCGCAACGGCAGGATGGAAACAGTTTTCGACAACCTCTCCGTGCCGAGTGGCCTGGCCTGGACCGCTGACGGACGACGCCTATATCTCGTGGACTCGGGGCGCAGGCTCATTCTCACGGCCGACTACGATCCCGACTCCGGTCGGGTCGGCCCGCTTTCCGAGTTCATGCGGCTCGACCCGTCGGAAGGCACGCCGGACGGCATGGCGGTCGATCGCGACGGCGGCATCTGGGTGGCCATGTGGGACGGCTGGTCGATACTCCGCTTCGACGCCAACGGGCAAAGGACCCGTCGCATAGACATGCCGATCCCCCGTCCGGCCGGGCTATCCTTCGGCGGGCCGGACGGGCGCACCCTTTATGTCACCACCGCCAGAATCCGGCTTTCTTCGCGCGTCCTGAACGAAGCGCCGCTTTCTGGACGGGTTTTCTGGATCCGGACCGAACATGAAGGCGTCGCCTCGTCCACCATCTCCCATTTCTGA
PROTEIN sequence
Length: 239
PDMGVVCGWSESGDLIFADGRGVFRHDATGEREVRIAEFPRSQSANRLNNSAIDPNGGVWLTSMNIRAHPGEGEVLRVRNGRMETVFDNLSVPSGLAWTADGRRLYLVDSGRRLILTADYDPDSGRVGPLSEFMRLDPSEGTPDGMAVDRDGGIWVAMWDGWSILRFDANGQRTRRIDMPIPRPAGLSFGGPDGRTLYVTTARIRLSSRVLNEAPLSGRVFWIRTEHEGVASSTISHF*