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scnpilot_p_inoc_scaffold_3102

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3102_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..718
DNA (717bp) protein (239aa)
IclR family transcriptional regulator n=1 Tax=Rhizobium radiobacter RepID=UPI0003754F38
IclR family transcriptional regulator {ECO:0000313|EMBL:EPR18490.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr
IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_3102_2
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(754..1914)
DNA (1161bp) protein (387aa)
oxidoreductase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F122
Oxidoreductase {ECO:0000313|EMBL:KGJ10823.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobaci
putative oxidoreductase
scnpilot_p_inoc_scaffold_3102_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1911..2978)
DNA (1068bp) protein (356aa)
AP endonuclease n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F121
AP endonuclease {ECO:0000313|EMBL:KEA08008.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agro
hypothetical protein
scnpilot_p_inoc_scaffold_3102_4
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3003..4874)
DNA (1872bp) protein (624aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=1 Tax=Paracoccus sp. N5 RepID=UPI00037E1BE9
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000313|EMBL:KGJ10827.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;"
iolD; myo-inositol catabolism
scnpilot_p_inoc_scaffold_3102_5
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5048..6478
DNA (1431bp) protein (477aa)
PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14C33
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGJ10829.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (
gabDch; succinate-semialdehyde dehydrogenase
scnpilot_p_inoc_scaffold_3102_6
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6489..7298
DNA (810bp) protein (270aa)
Hydroxyacid aldolase protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JGN2_AGRRK rbh
hydroxyacid aldolase
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:KEA08014.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium grou
scnpilot_p_inoc_scaffold_3102_7
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7298..8260
DNA (963bp) protein (321aa)
D-3-phosphoglycerate dehydrogenase protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JGN1_AGRRK
serA; D-3-phosphoglycerate dehydrogenase
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJK79508.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
scnpilot_p_inoc_scaffold_3102_8
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8279..9235
DNA (957bp) protein (319aa)
transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F875 rbh
Transcriptional regulator {ECO:0000313|EMBL:KGJ08434.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutu
transcriptional regulator
scnpilot_p_inoc_scaffold_3102_9
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9290..9709)
DNA (420bp) protein (140aa)
FGGY carbohydrate kinase domain-containing protein {ECO:0000313|EMBL:CDX42163.1}; EC=2.7.1.- {ECO:0000313|EMBL:CDX42163.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
FGGY-family pentulose kinase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X2S1_OCHA4
FGGY-pentulose kinase family protein
scnpilot_p_inoc_scaffold_3102_10
unknown

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9732..10046
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3102_11
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10079..10474)
DNA (396bp) protein (132aa)
Putative transposase y4qE n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CS55_9RHOB
Putative transposase y4qE {ECO:0000313|EMBL:EFO28627.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. Tric
transposase IS116/IS110/IS902 family protein
Displaying 11 items

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