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scnpilot_p_inoc_scaffold_3102_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1911..2978)

Top 3 Functional Annotations

Value Algorithm Source
AP endonuclease n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F121 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 352.0
  • Bit_score: 663
  • Evalue 1.60e-187
AP endonuclease {ECO:0000313|EMBL:KEA08008.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agro similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 353.0
  • Bit_score: 658
  • Evalue 5.60e-186
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 353.0
  • Bit_score: 655
  • Evalue 7.30e-186

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGAAAATGCAGACACTTAAGGGGCCCGGCGTGTTCCTCGCTCAGTTCGCCACGGACGAGGCGCCATACGACTCCTTGTCCGGCCTGGCGCGATGGGCGGCAGACAAGGGATTCAAGGGCGTGCAGATCCCGACCTGGGACCGGCGCCTGATCGATGTGGAACTCGCATCGATCAGTGACGGCTATTGCGACGAGATCAGGGGAATGCTGAGCGATCACGGGCTCGAAATCACCGAGCTGGCCTCTCATGTCACCGGCCAGCTGGTGGCCGTGCACCCGGCCCACGACAGGATCATGGACGGCTTCGCGCCGGAACATGTGAGGGGCAATCCGCGCAGGAGGCGGGCATGGGCCGAGGAGCAGCTGCGTTTCGCCGCCCGTGCCTCCAGGCGATTGGGCATCGATCGGCACGTCACCTTTTCGGGCGCGCTGCTATGGCCCTATCTCTACCCCTATCCCCAATGGCCGGACGGTCTGGTCGAGGAGGGATTTGACGAACTGGCCAGGCGTTGGCGCCCTGTTCTCGACGACTTCGACAGTTTTGGGGTGGATGTGTGCTACGAAATCCACCCCTGCGAGGACCTGCATGACGGTCACAGCTGGGAACTGTTCCTCGAAAAGGTCGGCATGCATCCGCGCGCCAACCTCATGTACGATCCGAGCCACTTGGTCCTGCAGGGCATGGACTATCTGGCCTTCATCGATCACTACCACGAGAGGATAAAGGCGTTTCACGTAAAGGACGCCGAATTTCGTCCCGACGGCAAATCCGGTGCCTATGGCGGCTACCAGCCCTGGGCGAAGCGAGCCGGAAGGTTTCGCAGCCCGGGCGACGGGCAGGTGGATTTCGGAGCGATCTTCACGAAACTTGCCACGGCGGGATTCGGTGGATGGGCCGTTCTGGAATGGGAATGCTTCGTGAAGAACCCTGAAGATGGTGCTGCCGAAGGCGCCCGCTTCATAGCCGATCGCATCATTCGCGTATCGGATCGCGCTTTCGACGACTTCGTGAAATCCGGCGCTGATCGCGGCGCCAACCGGGCGATGCTCGGGCTGGAGGAAAAATGA
PROTEIN sequence
Length: 356
MKMQTLKGPGVFLAQFATDEAPYDSLSGLARWAADKGFKGVQIPTWDRRLIDVELASISDGYCDEIRGMLSDHGLEITELASHVTGQLVAVHPAHDRIMDGFAPEHVRGNPRRRRAWAEEQLRFAARASRRLGIDRHVTFSGALLWPYLYPYPQWPDGLVEEGFDELARRWRPVLDDFDSFGVDVCYEIHPCEDLHDGHSWELFLEKVGMHPRANLMYDPSHLVLQGMDYLAFIDHYHERIKAFHVKDAEFRPDGKSGAYGGYQPWAKRAGRFRSPGDGQVDFGAIFTKLATAGFGGWAVLEWECFVKNPEDGAAEGARFIADRIIRVSDRAFDDFVKSGADRGANRAMLGLEEK*