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scnpilot_p_inoc_scaffold_5681_10

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(4206..4589)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GY27_CUPNN similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 104.0
  • Bit_score: 144
  • Evalue 7.00e-32
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 105.0
  • Bit_score: 149
  • Evalue 3.90e-33
transcriptional regulator LysR family similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 104.0
  • Bit_score: 144
  • Evalue 2.00e-32

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Taxonomy

RLO_Rhodoferax_60_11 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGTCGCTGCTGAGCCTACGTCAAATCGAGATGTTCCGCGCCGTGATGATCTGCGGCAGCATTACTGGCGCGGCCAACCTTATGAACCTGACCCAACCCGGCGTCAGTCGTACCATCGCGATGCTCGAAGGACGGCTGGGCTACGCACTATTCGTCAGGAAGGGCCGTAGAATCATCCCAACGGTCGAGGCCGAAGCACTCTACCGAGAAGTAGAGAAGAGCTATCGCAGCATCGAATATGTTGGGCAGATCGCGGCAGATATAGGCCTGCAGCGGGCGGGGGCACTCCGCATCGCCACTTTGCCAGCGCTTGCCCAATGGCATGGATGGCGTCAACGGGCTGACGCAACCACCCATCAAACCGGGCAAGACCTTTGTCTATGA
PROTEIN sequence
Length: 128
MSLLSLRQIEMFRAVMICGSITGAANLMNLTQPGVSRTIAMLEGRLGYALFVRKGRRIIPTVEAEALYREVEKSYRSIEYVGQIAADIGLQRAGALRIATLPALAQWHGWRQRADATTHQTGQDLCL*