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scnpilot_p_inoc_scaffold_5681

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5681_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_5681_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226..495)
DNA (270bp) protein (90aa)
hypothetical protein id=1351594 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_scaffold_5681_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(554..1039)
DNA (486bp) protein (162aa)
hypothetical protein id=12497693 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_5681_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1072..1407)
DNA (336bp) protein (112aa)
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Conserved hypothetical secreted protein id=1351592 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
scnpilot_p_inoc_scaffold_5681_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1419..1856)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein id=12497695 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_5681_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2094..2312
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E9239
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_5681_7
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2360..2695)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2M0V6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL91338.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="P
hypothetical protein
scnpilot_p_inoc_scaffold_5681_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2732..3244)
DNA (513bp) protein (171aa)
Putative copper-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XJN1_VARPD
blue (type 1) copper domain protein
Putative copper-binding protein {ECO:0000313|EMBL:AGU52766.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
scnpilot_p_inoc_scaffold_5681_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3272..4267)
DNA (996bp) protein (332aa)
Multicopper oxidase type 3 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5E7_LEPCP
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:ACB33535.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholo
scnpilot_p_inoc_scaffold_5681_10
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4206..4589)
DNA (384bp) protein (128aa)
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GY27_CUPNN
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
transcriptional regulator LysR family
scnpilot_p_inoc_scaffold_5681_11
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4871..5911
DNA (1041bp) protein (347aa)
spermidine/putrescine ABC transporter ATPase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023776C6 rbh
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
spermidine/putrescine transport system ATP-binding protein
scnpilot_p_inoc_scaffold_5681_12
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5908..6765
DNA (858bp) protein (286aa)
Spermidine/putrescine transport protein, ABC transporter permease protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CLB3_9BURK rbh
ABC transporter; permease component Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
binding-protein-dependent transport systems inner membrane component
scnpilot_p_inoc_scaffold_5681_13
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6762..6962
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030C4906
polyamine ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
potC; spermidine/putrescine transport system permease protein
Displaying 13 items

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