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scnpilot_p_inoc_scaffold_8970_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..414)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbE n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7KB49_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 138.0
  • Bit_score: 230
  • Evalue 1.40e-57
trbE; P-type conjugative transfer protein TrbE similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 138.0
  • Bit_score: 230
  • Evalue 3.80e-58
Conjugal transfer protein TrbE {ECO:0000313|EMBL:AJA17306.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 138.0
  • Bit_score: 230
  • Evalue 1.90e-57

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGATGAGCCTTGCCGAATATCGCAACCGTCCCGCCACCCTCGCCGACTATCTGCCCTGGGCCGGATTGGTCGCGCCGGGCGTCATGCTCAACAAGGACGGTGCCTTCCAGCGCACCGCCCGGTTCCGCGGTCCCGATCTCGACAGTGCGACGGAAAGCGAGCTGGTCGCGACGACGGCGCGGCTCAACAACGCGCTGAAGCGTCTCGGCTCCGGCTGGGCGCTGTTCGTCGACGCCGAGCGGCGCATTGCCGACGGCTATCCCGTTTCCGAGTTTTCCGAGGCCGTATCCTGGCTGGTCGAGGAAGAACGGCGCGCGGCCTTCGAGGAAGGCGGCACGCATTTCGAGAGCGCCTATCACATCACGCTCGCCTTCCTGCCGCCGTCCGAAGGCAAGGCCCGCGCCGGCCAGCTC
PROTEIN sequence
Length: 138
MMSLAEYRNRPATLADYLPWAGLVAPGVMLNKDGAFQRTARFRGPDLDSATESELVATTARLNNALKRLGSGWALFVDAERRIADGYPVSEFSEAVSWLVEEERRAAFEEGGTHFESAYHITLAFLPPSEGKARAGQL