ggKbase home page

scnpilot_p_inoc_scaffold_8970_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(419..682)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, TrbD component n=3 Tax=Gammaproteobacteria RepID=A4AAL4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 86.0
  • Bit_score: 143
  • Evalue 1.40e-31
conjugal transfer protein TrbD similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 86.0
  • Bit_score: 143
  • Evalue 3.90e-32
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KHA63740.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 86.0
  • Bit_score: 143
  • Evalue 1.90e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. Ant20 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGCCGCGCATGTCGAGGGCTTCGAGGTGCCTTTGCACCGCTCCCTGACCGAGCCGGTCCTGATGGGCGGCGCGCCCCGGTCGGTGGCGATCCTCAACGGCACGCTCGCGGCCGCCATCGGCATCGGCCTGCAATTGTGGATCGGCGGGGTGCTGCTCTGGATGGCGGGCCATGCGCTCGCCGTCTGGGGTGCGAAGGCCGATCCGCAATTCATGGAGGTCTTCTCCCGCCACCTGAAGCACCGCGCGTTCATGGAGGCATGA
PROTEIN sequence
Length: 88
MAAHVEGFEVPLHRSLTEPVLMGGAPRSVAILNGTLAAAIGIGLQLWIGGVLLWMAGHALAVWGAKADPQFMEVFSRHLKHRAFMEA*