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scnpilot_p_inoc_scaffold_13762_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1733..2341)

Top 3 Functional Annotations

Value Algorithm Source
TraH n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL86_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 204.0
  • Bit_score: 283
  • Evalue 2.00e-73
Conjugal transfer protein TraH {ECO:0000313|EMBL:KGE80005.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 202.0
  • Bit_score: 376
  • Evalue 1.90e-101
traH; Conjugal transfer protein TraH similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 206.0
  • Bit_score: 275
  • Evalue 8.90e-72

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGCTGGAAGCTGCGCTGATCAAGGAATGTGCCGACCCATCGTTGAAGCCGGCAATCGTCGAACAGTTCGTCCAGGCGGTCGGCTCAGAAGATCCGCTCGCCATTACCGTCAAATCTGGCGGCCGACTGATCCTCGTTCCCAAACCGAAAACGCCCGAGGAAGCCATCGAGATTGTTCGCGAGAACATTGGTGGTTCCGTTGTGCGGGTGGGCCTGACACAGATCCCGGCGGGAATCGGTCTGAAGGACGCGTCGGAGCTGAAGGCTGATCTGGTTGACCCCTGCGCGAATCTGCGCATGGGCACGACGATGTTTGCCAAGATCCTTCGCATCGTCGCGAAATGGTATGGAAACCCGACGAGCGAGGAGGTCTTTCCGCAGCTCTTCGACGATGCTGTCCATGCTTGGCAGACCGGAAAGTTCGAGGGGGAGAGCGTGTTCCAGGCGGAGGACCCAGGTGACGCGGTCGTGCAAAAATCGGAGGAGACGGTGGATGATGCAGAAGAGGCTCCGGAGGCCGAAGCCACGCCCCAGGAGAAAGACGAGCCGTCGAAGCCTGACGATGCCGGCATTCGTATCGATCTGACGAGGATCGGCGGCCAGAAATAG
PROTEIN sequence
Length: 203
MLEAALIKECADPSLKPAIVEQFVQAVGSEDPLAITVKSGGRLILVPKPKTPEEAIEIVRENIGGSVVRVGLTQIPAGIGLKDASELKADLVDPCANLRMGTTMFAKILRIVAKWYGNPTSEEVFPQLFDDAVHAWQTGKFEGESVFQAEDPGDAVVQKSEETVDDAEEAPEAEATPQEKDEPSKPDDAGIRIDLTRIGGQK*