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scnpilot_p_inoc_scaffold_13762_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2356..3516)

Top 3 Functional Annotations

Value Algorithm Source
Rcorf79 n=1 Tax=Agrobacterium rhizogenes RepID=A8W099_AGRRH similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 393.0
  • Bit_score: 535
  • Evalue 4.20e-149
  • rbh
Conjugal transfer protein TraB {ECO:0000313|EMBL:KGE80006.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 385.0
  • Bit_score: 699
  • Evalue 2.40e-198
traB; putative conjugal transfer protein traB similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 388.0
  • Bit_score: 524
  • Evalue 2.80e-146

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGCGCCGTGAGCTTTTCCGAACGGGTGTCCTCGTCGCGCTATCGACGAGCGCGGGGTGGATCGGCTGGAGCGGTAATGTGCTTCTCTTGCCCGTGGCGGCCACCTTCCCCATGCTATGGTCCTTGGCACTGACGCGTCTGCAGGCAACGGCGATCTCTGCTGCCTACTTCCTCGCTGCATCGCGAGGACTGCCGCAGGGGGTGGCGAACTTCTATTCATCGGATATCTGGCCGGGCCTTCTCCTATGGCTGGTCGCTTCCTCCGCGTTCGTGGCGGTCCATTCGCTCCTCTTGTCGCATCGAAAGGAATGGCAAAAGCCGCTCCGTTATCTGGCTGCTTGCGTGGTAATGACGATCCCGCCTTTCGGCATTCTGGGATGGGCGCATCCGATCACTGCCGCAGGCGTTCTGTTTCCCGGCTGGGGATGGTGGGGTCTGGGCGCGATGGCAGCCGGCCTGATCGTCATGACGACGCGATATCGGCCGGCTGCAGCCATAACCATGACAGGCTTCTGGCTCTGGTCCGCCGCTGAGTGGACGCCGCCGACCCTACCTGCGTCGTGGAAAGGTGTCGACCTTGAAGGGGGCGCATCGCTCGGGCGTGAGGCTGGTCTCGAGCGGCAACAGGAGTTGATCGACGTTGCTCACGCCCAACCGCCGGGCACAATCCTCGTGCTGCCGGAAAGCGCTGTCGGTTTCTGGACGCCGACGGTTGGCCGCGTCTGGCAGAGAGCGCTCACGGATACGGGCATCACCGTCATCTCGGGAGCAGCCATCATCGACAGCCAAGGCTACGACAATGTACTTGTAAAACTGTCGGCGGATGGAAGCGACATTCTTTACCGGGAGCGCATGCCCGTGCCCGGATCAATGTGGCAGCCGTGGCGAGGTTGGATCGGCGATAACGGCGGTGCCCGGGCACATTTCTTCGCGAACCCCGTCGTTGACGTCGGCAGCCAGAGTGTGGCGCCACTGATCTGCTACGAGCAGCTTCTGGTCTGGCCGATCTTGCAATCGGCTTTCCATCGGCCCGATGCCATGGTCGCAGTCGGAAACGGCTGGTGGACCAAGCGAACATCGATCATCGCCATTCAACGGGCAAGCAGTGAGGCCTGGGCCCGCCTGTTCGACCTGCCTCTCGTAATCTCGTTTAACAGTTAA
PROTEIN sequence
Length: 387
MRRELFRTGVLVALSTSAGWIGWSGNVLLLPVAATFPMLWSLALTRLQATAISAAYFLAASRGLPQGVANFYSSDIWPGLLLWLVASSAFVAVHSLLLSHRKEWQKPLRYLAACVVMTIPPFGILGWAHPITAAGVLFPGWGWWGLGAMAAGLIVMTTRYRPAAAITMTGFWLWSAAEWTPPTLPASWKGVDLEGGASLGREAGLERQQELIDVAHAQPPGTILVLPESAVGFWTPTVGRVWQRALTDTGITVISGAAIIDSQGYDNVLVKLSADGSDILYRERMPVPGSMWQPWRGWIGDNGGARAHFFANPVVDVGSQSVAPLICYEQLLVWPILQSAFHRPDAMVAVGNGWWTKRTSIIAIQRASSEAWARLFDLPLVISFNS*