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scnpilot_p_inoc_scaffold_24111_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2713..3102

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Variovorax paradoxus RepID=UPI00037A734F similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 129.0
  • Bit_score: 247
  • Evalue 1.00e-62
Variovorax paradoxus strain MEDvA23 contig_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31414.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 129.0
  • Bit_score: 243
  • Evalue 1.60e-61
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 129.0
  • Bit_score: 242
  • Evalue 7.00e-62

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCCCTCATCACGTTCCTCGTCGAGGACAACAAGACCATCAGGGACAACCTGGTCCCGGCACTGGAGGACCTGGTCAATGGCCGTGTGGTCGGCTTCGCCGAAACCGAATCGGATGCACTGGCATGGATCGCGGCGCACCCGGACGACTGGCAGCTCCTCATCGTCGACCTGTTCCTCAAGGAAGGCTCCGGCCTCGGTGTGCTCGCCGGCTGCAAGACACGCAAGCCCGGCCAACGGGTCGTGGTGCTGAGCAACTACGTCACGGCAGACATCCGCTCACGCTGCGGTGCTCTTGGAGCCGATGCGGTATTCGACAAGTCGCGTGACCTCGACGCCTTCATCGAGTACTGCAACGCGGACCGCCCGTCAGGGCTCGCACCGCTGTAA
PROTEIN sequence
Length: 130
MALITFLVEDNKTIRDNLVPALEDLVNGRVVGFAETESDALAWIAAHPDDWQLLIVDLFLKEGSGLGVLAGCKTRKPGQRVVVLSNYVTADIRSRCGALGADAVFDKSRDLDAFIEYCNADRPSGLAPL*