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scnpilot_p_inoc_scaffold_24111_7

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3175..3846)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036CA28A similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 223.0
  • Bit_score: 441
  • Evalue 6.30e-121
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL76588.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 223.0
  • Bit_score: 439
  • Evalue 3.40e-120
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 223.0
  • Bit_score: 435
  • Evalue 1.30e-119

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
AAGTACGCAGTCGAAACGCTCAAGGGCAAGAACATTGCCGTGATCGACGACCGTACGGCTTACGGCCAAGGCGTTGCCGAAGAATTCGAGAAGTCGGCCAAGGCCGCCGGCGCCACCATCGTGGGCCACGAATTCACCACTGACAAGTCGACCGACTTCAACGCCATCCTGACCAAGCTCAAGTCGGCCAAGCCCGACGTGCTGTTCTTCGGCGGCATGGACGCCGTGGGCGGCCCGATGCTCAAGCAGGTCAAGCAACTCGGCCTGAACGTCAAGTTCATGGGTGGCGACGGCCTGTGCACCGGCGAACTGCCGAAGCTGGCTGGCGATGCCATCGGCGAAGACATGGTGGTGTGCGCTGAAGCCGGCGGCGTGGACGGCGACTTCAAGCAACCTCTGGAAGACTTCAAGGCCAAGTTCAAGACCAAGAACGGCGTGGAAGTGCAGATCTATGCACCGTACGTGTACGACGCGGTCAACGTGCTGGCTGAAGCCATGGTCAAGGCCGGCTCGTCCGACCCCGAAAAGTACCTGCCGGAAGTCGGCAAGGTGCAATACAAGGGCGTGACCGGCCCGATCGCCTTCGACGAAAAGGGCGACATCAAGAACGGCGCGCTGACGCTGTACACCTACAAGGGTGGTGCACGCACGCAAATCGCCGTGGTGCGTTGA
PROTEIN sequence
Length: 224
KYAVETLKGKNIAVIDDRTAYGQGVAEEFEKSAKAAGATIVGHEFTTDKSTDFNAILTKLKSAKPDVLFFGGMDAVGGPMLKQVKQLGLNVKFMGGDGLCTGELPKLAGDAIGEDMVVCAEAGGVDGDFKQPLEDFKAKFKTKNGVEVQIYAPYVYDAVNVLAEAMVKAGSSDPEKYLPEVGKVQYKGVTGPIAFDEKGDIKNGALTLYTYKGGARTQIAVVR*