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scnpilot_p_inoc_scaffold_30483_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 85..1782

Top 3 Functional Annotations

Value Algorithm Source
Putative multidrug resistance protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8D2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 551.0
  • Bit_score: 948
  • Evalue 3.10e-273
Putative multidrug resistance protein {ECO:0000313|EMBL:ENN88834.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 551.0
  • Bit_score: 948
  • Evalue 4.30e-273
putative RND efflux transporter similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 551.0
  • Bit_score: 946
  • Evalue 3.30e-273

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGAATTTCACCGACCTCTTCATCCGCCGCCCCGTGCTCGCCCTGGTGGTGAGCGCGCTGATCGTGGTCATCGGCTACCAGTCGTTCCGGACGCTTACGGTGCGGCAGTTTCCGCGCACGCAGCACGCGGTGGTCACTGTGACGACCGTCTATCCTGGCGCGGCGCCGGACGTCATCGCGGGCTTCATCACGACACCGCTGGAAAACGCCATCGCCCAGGCCAACGGCATCGACTACATGACCTCGTCGAGCACCAGCGGCGTGTCCACGATCACCGTCAACCTGCGCCTGAACTACAACGCCGACGCGGCGATGACCGAGATCAACGCCAAGATGTCCTCGGTCATCAACCAGCTCCCGTCGGGCACACAGCAACCGACCATGTCGGTCTCCGTCGGCCAGACGATCGACGCCATGTACATCGGCTTCCGCAGCGACGTGCTGGCCGCCAACCAGATCACCGATTACCTCACCCGCGTGGTCCAGCCGAAGCTGCAGGCGGTGAACGGCGTGCAGACGGCTGAAATCCTCGGCGGCCGGACTTTTGCTCTCCGGGCCTGGCTGAAGCCCGACAAGCTGGCCGCCTATGGCTTGACCGCCGGCGACGTGTGGACCGCGATGGCGGCCAACAATTACATTTCCGGCATCGGCACCACACGCGGTCAGATGACCCAGACGGTGCTGACGGCGAGAACGTATCTGCATTCTACCGACGAATTCGCCGACCTGGTCGTGAAGCAGATCGGCGGCGCGATCGTACGCCTCAGGGATGTCGCCACCGTCGCGCTGGGATCGCAGAACCCGGATGTGCAGGTCGCGTTCGACGCCAAGACCGGCGTCTTCATCGGCATCCAGATCGCGCCGACGGCGAACCTGCTCGACGTCATCTCGGGCGTGCGCGCGGTCTTTCCCGCTATCCAGGCGCAGTTGCCGCAAGGGCTGGAGGGCTACATCGTCTACGATTCCAGCACCTTCGTGACGCAGTCGATAAACGAGGTGGTCAAGAGCCTGGTCGAGGCGCTGGTCATCGTCATCTTCGTGGTGTTCGCGTTCCTCGGCTCGCCGCGCTCGGTCGCCATTCCCATCGTCGCCATACCGCTGTCGCTGATCGGCGCCTTCGCCATGATGCTGGTCTTCGGCTTCTCGATAAACCTGCTGACGCTGCTCGCGCTGGTTCTCGCCATCGGCCTCGTCGTCGACGACGCGATCATCGTGGTCGAGAACGTCAACCGCCACATCGAGGAAGGCGCCCAGCCCATGGACGCGGCGTTCGCCGCCGCGCGCGAGCTGGTCGGGCCGATCCTAGCGATGACCGTCGTGCTCATCGCGGTCTATGTTCCGATCGGTTTCCAGAGCGGTCTGACGGGCGCCCTCTTCACCGAATTCGCCTTCACCCTGGTCGGCGCCGTCGCCGTCTCGATGACGGTCGCGCTGACGCTGACGCCGATGCTGTGCTCGCGCATACTCAAGCCGCATCTGGCCGACCGCTCCGGTTGGGAGGAGCGCGTCTCGGATTTCATCGATCGCCGCTTCTCGGAGATCCATCGCCCCTACATGCGCATGCTGCACGGAAGCCTCAACACTGTGCCGGTGACTCTGGTGTTCGCGGCGATCGTTCTGGGCAGCATCTATTTCCTCTATGCCGGCGCCAAGATCGTGCGCGTGATCGACGACTGCATCGTCGAGCCGTTCGCATAA
PROTEIN sequence
Length: 566
MNFTDLFIRRPVLALVVSALIVVIGYQSFRTLTVRQFPRTQHAVVTVTTVYPGAAPDVIAGFITTPLENAIAQANGIDYMTSSSTSGVSTITVNLRLNYNADAAMTEINAKMSSVINQLPSGTQQPTMSVSVGQTIDAMYIGFRSDVLAANQITDYLTRVVQPKLQAVNGVQTAEILGGRTFALRAWLKPDKLAAYGLTAGDVWTAMAANNYISGIGTTRGQMTQTVLTARTYLHSTDEFADLVVKQIGGAIVRLRDVATVALGSQNPDVQVAFDAKTGVFIGIQIAPTANLLDVISGVRAVFPAIQAQLPQGLEGYIVYDSSTFVTQSINEVVKSLVEALVIVIFVVFAFLGSPRSVAIPIVAIPLSLIGAFAMMLVFGFSINLLTLLALVLAIGLVVDDAIIVVENVNRHIEEGAQPMDAAFAAARELVGPILAMTVVLIAVYVPIGFQSGLTGALFTEFAFTLVGAVAVSMTVALTLTPMLCSRILKPHLADRSGWEERVSDFIDRRFSEIHRPYMRMLHGSLNTVPVTLVFAAIVLGSIYFLYAGAKIVRVIDDCIVEPFA*