ggKbase home page

scnpilot_p_inoc_scaffold_30483_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1722..2033)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036D7895 similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 199
  • Evalue 1.50e-48
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 99.0
  • Bit_score: 194
  • Evalue 1.70e-47
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411}; Flags: Precursor;; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 99.0
  • Bit_score: 194
  • Evalue 8.70e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pandoraea oxalativorans → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
CAGACGCTCGCGCCGACCGCGCCGCAGTACGAGTCGGTGCCGGAACTGTCGGCGACCTACAACAAGCTGGACTTCCACGGCTTCGATTTCACGATGCCGATCAAGTACAACCGGTTCCAGATTGCGTCGTCGACGGGGCAGCCAAATGGCGAGCGCCTTTATGCGCAGCCGACGTTGAGCTACCCGATCCTGACCCCTGGCTACTTTATCGTGCCGAAGGTCATCTTCAACGCGGCCGCGTACAACATCGATTATGCGAACGGCTCGACGATGCAGTCGTCGATCACGCGCACGATCTTGGCGCCGGCATAG
PROTEIN sequence
Length: 104
QTLAPTAPQYESVPELSATYNKLDFHGFDFTMPIKYNRFQIASSTGQPNGERLYAQPTLSYPILTPGYFIVPKVIFNAAAYNIDYANGSTMQSSITRTILAPA*